Notechis scutatus (mainland tiger snake): 113426105
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Entry
113426105 CDS
T09026
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03020
RNA polymerase
nss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113426105 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
113426105 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113426105 (POLR2B)
03400 DNA repair and recombination proteins [BR:
nss03400
]
113426105 (POLR2B)
Enzymes [BR:
nss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113426105 (POLR2B)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113426105 (POLR2B)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113426105 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
113426105
NCBI-ProteinID:
XP_026544226
Ensembl:
ENSNSUG00000007298
UniProt:
A0A6J1VMF1
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPSRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMITLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgcggacgaagatatgcaatatgatgaggatgatgatgaaatcactccagat
ctgtggcaagaagcatgctggattgtcatcagctcctattttgacgaaaaaggtctggtt
cgacagcagctggattcttttgatgagttcattcagatgtctgtgcaaagaattgtagaa
gatgccccaccaattgatctacaagcagaagctcaacatgctaccggtgaagtagaagaa
ccgccacgttatcttttgaaatttgaacaaatttatctgtccaagccaactcattgggaa
agagatggtgctccttcacctatgatgccaaatgaagccaggctcagaaatcttacgtat
tctgcaccactgtatgtggacataactaagacagttattaaggaaggagaagaccagttg
cagacacaacatcaaaaaacattcataggaaaaattccaatcatgctgcgatccacatac
tgcctattaaatggtttgactgatcgtgatctttgtgaactgaatgaatgccctcttgat
cccgggggctattttattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtatatgtgtttgcaaagaaagattctaaatatgcatacacaggagag
tgtcgttcttgcctggagaactcatctcgaccgacaagtactatatgggttagcatgtta
gccagaggtgggcagggtgcaaagaagagtgcgataggtcaacgtattgtggcaactttg
ccatatatcaagcaggaagtgcccatcattattgtgttccgtgcattggggtttgtatct
gacagagacatcttggagcatataatttatgactttgaagatcctgagatgatggaaatg
gttaagccctctttggatgaagcatttgtcattcaggaacagaatgttgcattgaatttc
attggttcaagaggtgcaaagcccggtgtcactaaagagaagagaatcaagtatgccaaa
gaagtcttacagaaagaaatgcttccacatgttggtgtcagtgacttctgtgaaacaaaa
aaggcttattttcttggatacatggttcatagattgttgctagcagccttagggagacga
gaactagatgatagggatcactacggcaacaagcggcttgacctggcaggacctttgctt
gctttcctcttcagaggaatgtttaagaatttgctgaaagaagttagaatatatgcccag
aaatttattgacagaggcaaagattttaacttggagttggcaattaaaacaaggattata
tcagatggtttgaaatattcattagcaactggcaactggggagatcagaagaaagctcac
caggctagagctggagtatcacaagtattgaatcgtctcacctttgcttctacgctttcc
catttgcgacgcttaaactcacctattggaagagatggtaaactagcaaagcccaggcag
ttgcacaacactttgtggggaatgatctgtcctgctgaaactccagagggtcatgctgtg
gggcttgtgaagaatcttgctctgatggcctatatttctgtggggtctcagccatcccca
attctggaatttttagaagaatggagtatggaaaacttggaagaaatctccccagcagca
attgcagatgccacaaaaatatttgtgaatggttgctgggttggaattcacaaagatcca
gagcagcttatgaatacgctgagaaaactgcgacggcaaatggatatcattgtatcagag
gtgtccatgatcagagatatcagggaacgagaaattcgcatttatactgatgctggtagg
atctgccgcccacttctaattgtggaaaaacaaaaattgttactgaagaagaggcatata
gaccaattgaaagaacgtgaatataacaactacagctggcaggatttggtggccagtggt
gtagtagaatacattgacactctagaagaggagactgttatgctggctatgactccagat
gacttacaggagaaaggtgtggcatattgttccacatatacacactgtgagattcatccc
tccatgattctaggagtttgtgcatctattattccatttccagatcacaatcagtctcct
aggaatacataccaatctgctatgggcaaacaagccatgggagtttatatcactaatttc
catgtccgtatggataccctggcccatgttttatattatcctcagaagcctcttgtgacc
acacgttctatggaatatttgaggttcagagagttgccagcaggcatcaactctatagtc
gccatagcttcatatacaggatataatcaagaagactctgttatcatgaaccgctctgct
gttgacagaggttttttcagatctgtgttctatcgctcgtataaagaacaggagtcaaaa
aaaggatacgaccaagaagaagtgtttgagaaacctagtcgtgaaacatgccaggggatg
aggcatgccatctatgacaagctggacgacgatggtttgattgcacctggcgtacgtgtc
tcaggagatgatgtcatcattggcaagacggtaactttgcctgagaacgaagatgaactg
gagagcaccaatcgtcgctataccaaaagggattgcagcacttttctacgaactagtgaa
actggtatcgttgaccaggtcatgattaccttgaaccaggaaggatacaagttttgtaaa
ataagagtacggtctgtccgaataccacagattggagataagtttgctagcagacatggt
cagaaaggtacctgtggtatccaatacaggcaagaggatatgccatttacctgtgaaggc
atcactcctgatataattatcaatccccacgctatcccttcgcgaatgaccattggtcac
ttgattgaatgtcttcaaggaaaggtatcagcaaataaaggggagataggtgatgctaca
ccttttaatgatgcagtcaacgtgcagaagatttcaaacttgctctctgattatgggtat
catctgagaggaaatgaggttttgtacaatggctttactggtcgcaaaatcacatcacag
atctttattggccccacttactatcagcgactaaaacacatggtagatgataaaattcat
tccagggcaagaggacctattcagatccttaacaggcagcctatggagggtcgatctcgt
gatggaggtcttcggtttggagagatggaacgagactgtcagattgctcatggagcagcg
cagttcctgagggaaagattgtttgaagcctcagatccatatcaggttcacgtatgcaac
ttgtgcgggctaatggcaatagcaaacacccggacccacacctatgaatgcaggggttgt
cgtaataagacacagatttctctggtgaggatgccatatgcctgcaaactacttttccaa
gaactgatgtcaatgagtattgcacctcgaatgatgagtgtgtag
DBGET
integrated database retrieval system
