Notechis scutatus (mainland tiger snake): 113426333
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Entry
113426333 CDS
T09026
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03008
Ribosome biogenesis in eukaryotes
nss03013
Nucleocytoplasmic transport
nss03015
mRNA surveillance pathway
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113426333 (NXF1)
03015 mRNA surveillance pathway
113426333 (NXF1)
03008 Ribosome biogenesis in eukaryotes
113426333 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113426333 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113426333 (NXF1)
03009 Ribosome biogenesis [BR:
nss03009
]
113426333 (NXF1)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113426333 (NXF1)
mRNA cycle factors
Stress granule specific factors
113426333 (NXF1)
Ribosome biogenesis [BR:
nss03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113426333 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
TAP_C
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
113426333
NCBI-ProteinID:
XP_026544480
Ensembl:
ENSNSUG00000012985
UniProt:
A0A6J1VNB0
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MADGGKYSEHDDRVGPSNRNFVRRRKGRVPFRGKMYSEMGHHQRGWNSSGSGSRSWLDDD
DGDVLMSDAHEVLRTRYTPYGSRPHRPDRGSQSLMNATVRRNLNIGDRALPQKPPVSKKT
WFRITIPYGRKYERSWLMNAIRETCTVPFNPVEFHCVNNRVVFFVEDTSVANALKQTSRK
ISAPDGHKVAILINTCNPPTTVQHELKPEDIEQLKQCMSKRYDSSHQALDMKNIHADPDL
IARNIDIVLNRRNCMAAMLQIVGDNIPELLSLNLSDNKLYRLDDLAGLHRKAPNLKILNL
SCNQLKTEHELDKLKGLKLDELWLDNNPLCDGFRDRSSYISTIRERFPKLLRLDGNDLPP
PISFDLQTPTTLPQFKGSYFASEGLKVLIARFLQQYYAIYDSGDRQGLLDAYHEAACCSL
NIPFSVNHPQRTALAEYFKNSRNVKRQKDPSLRFRLLKHTKLNVVAFLSELPKTQHDVNS
FVVDVCAQTNTLLCFTLKGIFKEVDSRFRDVVRAFSRIFIAVPVGLSGLSIVNDQIFIRK
ATITEIRKAFVMPAPTPSSSPVPIPSTEPMPALSPGPTLTAEQQEMLQNFSLQSGMNLEW
SQK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgggaaatacagcgaacatgacgaccgcgtgggccccagcaacaggaac
tttgtgcggaggagaaaaggccgcgtccctttccgggggaaaatgtacagcgagatgggc
catcaccagcgtggctggaacagttctgggtccggttctcgtagctggctcgatgacgac
gatggagacgttctcatgagcgatgcccacgaagtgctccggacacgctacactccttac
gggtcacgtccgcaccggccagaccgagggagccagagtcttatgaatgccaccgtgaga
cgaaatctgaatattggggaccgtgcccttcctcagaaaccgccagtaagcaagaagacc
tggttccggattacgattccttacggaaggaaatacgaaaggagctggctgatgaatgcc
atacgagaaacgtgcaccgtccccttcaaccctgtggagttccactgcgtgaataatcgg
gtggtgttcttcgtagaagacacttccgtggccaacgcccttaagcagacctctcgtaag
atctctgctccagatggacacaaggtggcgatacttataaacacgtgcaacccaccgacc
accgtccagcatgaactgaaaccagaagacattgagcaactgaagcaatgtatgagtaaa
aggtacgatagctcccatcaagctttggatatgaaaaatatccacgcagatcccgatctg
atcgcccggaacatcgacatcgtgttgaaccgccgaaactgcatggcggccatgctgcaa
atcgtgggcgacaacatccccgagctcctctccctcaatctcagtgacaacaagctctat
cgcctcgatgacctggctgggcttcatcggaaagctcccaacctgaagatcctcaacttg
tcttgtaaccagctgaagaccgaacacgagctagacaagctgaaaggcttaaagctggac
gaactgtggcttgacaacaaccccctttgcgatggctttcgggaccgttcctcttatatc
agcaccatccgagaacggttccccaagctgctgcggctggacggtaacgatctgcccccg
ccgatctcatttgatttacaaacgccaaccactctgcctcaattcaagggcagttatttt
gcctccgagggcttgaaagtgctgatcgcccgctttctacaacaatattacgccatctac
gattctggagacagacaaggcctgctggatgcctatcacgaggcggcctgctgttcgctg
aacatcccattctccgtgaatcaccctcagaggaccgctttggctgaatacttcaaaaac
agccggaatgtgaagcgacagaaagatccttccttgcgcttccgactcctcaaacacacc
aagttgaacgtcgtggctttcctcagcgaattgcccaagactcagcatgacgtgaattcc
ttcgtggtggacgtctgtgcgcaaacgaatacgttgctctgtttcaccctgaaaggaatc
tttaaggaagtcgacagccgctttcgggacgtcgtgcgggccttctcccggatcttcatt
gcggtccctgtgggcctcagcgggctgagcatcgtgaacgaccagatcttcatccgcaaa
gccaccatcacggaaatccgcaaggccttcgtcatgccggcccccaccccgtcctccagc
cccgtgcccatcccttccaccgagcccatgccggcgttgagccccgggcccaccctgacg
gccgagcagcaggaaatgctgcagaatttctccctgcagtcgggcatgaacctggagtgg
tctcagaagtga
DBGET
integrated database retrieval system
