Notechis scutatus (mainland tiger snake): 113426384
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Entry
113426384 CDS
T09026
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113426384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113426384
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113426384
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113426384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
113426384
NCBI-ProteinID:
XP_026544525
UniProt:
A0A6J1VNF5
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKIIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSINVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEMFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKGLHQPPPTIPPSYPMGGSSSTSSSVGNGPDSNSNGAIAGSGNASNKANLAGHAP
TTPTPYAQAVAPLPPSTNALQPRPPSTQQNASKQNGATSYSSVVADSSSDSTLSSGNQLL
PNQTASHNPPSASTKTKQVKSGHPIGAGLHCQVFGLLSTSLHAYSVLQEPGYSYIEPGAF
QALALVAAAALMPALYPHTRHETCSTHQSQGCSLAPAALMVLPFLFAPADILITSTTSQP
ASNQPPIQLSEVNIPLSLGVCPLGPVPLIKEQLYQQAMEEATWHHMPHPSDSERIRQYLP
RNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFH
TKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcagataagaggaagctacaaggtgagatcgatcggtgtctcaaaaaggtatcggaa
ggtgtggagcagtttgaagatatctggcagaagctccataatgcagcgaatgccaatcag
aaggagaaatatgaagccgatctgaaaaaggagattaagaagctccagagattgagggac
cagatcaagacatgggttgcatccaatgagattaaagacaaaaggcagctaatagacaac
cggaaaatcattgagacgcaaatggagcggttcaaggtagtggaacgtgagaccaagaca
aaagcctactctaaagagggtttgggcctggcccagaaagtggacccagcccagaaggag
aaagaggaagttgggcagtggctgacgaatacaatagacaccttgaatatgcaggtggat
cagtttgagagcgaagtagagtcactctcggtccagacgcgcaagaagaaaggagacaag
gataagcaagaccggattgagggcctgaagcggcacattgagaagcatcggtaccacatc
cggatgctggagacaattctgcgcatgctggacaatgactccatcaacgtggactctatc
cgcaaaatcaaggacgatgtggagtattacgtagattcttcgcaagaccccgattttgag
gagaatgagtttctctatgatgacctcgacttagaagacattccacaggcactggtagcc
acttccccacccagccatagtcacatggaagatgagatgttcaaccagtccagcagtaca
cccacctcaaccacatccagctccccaatcccgcccagccctgcaaactgcacaacggag
aactctgaagatgataagaaacgaggacggtcaacagacagtgaagtcagccaatcccca
gcaaagaacggttcaaaaggcctccaccagcctcctcccaccatccctcccagctacccg
atgggcggcagctctagcacatcatcctccgtgggcaatgggcctgactccaacagcaac
ggggcaatcgctggcagtgggaatgcaagcaacaaagctaacctggcagggcacgcaccg
actaccccgaccccttatgcgcaggctgtggcacccctgcctcccagcaccaacgccttg
cagccccggcctcctagcacccagcagaacgccagcaaacagaatggtgcaactagttac
agctctgtggtagccgacagcagctcagattcgacactaagcagtggcaatcagttgttg
cctaaccagacagcatcacacaacccacccagtgcttccacgaagacgaagcaggtgaaa
agtgggcacccgataggtgctggcctgcattgtcaagtgtttgggctgctaagcaccagc
ctgcatgcctattcagtgctgcaggagccgggctacagctacattgagccaggagctttt
caggccctggccctggtggctgctgcagctctcatgccagctctgtacccccacacacgg
catgagacctgcagcacccaccagagccagggctgtagcctggcacctgcagcactgatg
gttcttccttttttgtttgctccagctgacatcttaattactagcacaacatctcagcca
gcctccaaccagccccccatccagctatcagaggtgaacatccccctttcccttggggtg
tgccctctggggcccgtgcctctcattaaggagcagctgtaccaacaggccatggaagag
gccacctggcaccacatgcctcacccttctgattcggaaagaatccggcaatacctgcct
cggaatccctgtccgactcctccataccaccaccagatgcctcctccacactccgacacg
gtggaattctaccagcgcctctccacagagactcttttcttcatcttctactacctggag
ggtacaaaggcacaatacctggcagcaaaggcactgaagaagcaatcatggcgcttccat
acaaagtacatgatgtggtttcagcggcacgaagaacctaagaccatcactgatgagttt
gagcagggcacttacatctactttgactacgagaaatggggccagcgcaaaaaggagggt
ttcacctttgaataccgctacctggaagaccgggacctgcagtga
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