Notechis scutatus (mainland tiger snake): 113426468
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Entry
113426468 CDS
T09026
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03022
Basal transcription factors
nss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113426468 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
113426468 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113426468 (ERCC2)
03036 Chromosome and associated proteins [BR:
nss03036
]
113426468 (ERCC2)
03400 DNA repair and recombination proteins [BR:
nss03400
]
113426468 (ERCC2)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113426468 (ERCC2)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113426468 (ERCC2)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113426468 (ERCC2)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113426468 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
DEAD
ResIII
Helicase_C_2
SesA
Motif
Other DBs
NCBI-GeneID:
113426468
NCBI-ProteinID:
XP_026544618
UniProt:
A0A6J1VVJ0
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MKLNIDGLLVLFPHDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTTSLLAPIPAYR
QAYPLEVTKLIYCSRTVPEIEKVIEELRKLVHFHEKQTGQKLPFLGLALSSRKNLCIHPE
VSGLRFGKEVDSKCFSLTASYIRAQHQQDGSLPSCRFFEEFDASGRQVPLPYGVYNLDDL
KAYGQQKGWCPYFLARYSILHANIVVYSYHYLLDPKIADVVSKELAKKSVVVFDEAHNID
NVCIDSMGVNITRKVLDRCQGNVATLQAAIHRIKETDAQKLKEEYQQLLQGLREANAARE
TDVYLANPVLPDEILQEAVPGNIRTAEHFVAFLKRLLEYLKSRLRIHHVVQESPPSFLKD
IFEKVCIERKPLRFCAERLRCLLRTLEIADISDFSPITLISNFATLVSTYSKGFTILIEP
FDDRTPTILNPILHFSCMDASIAIKPVFERFQTVIITSGTLSPLDMYPQILDFRPVTMAT
FTMTLARTCLCPMIVGRGNDQVTISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMENIVASWYEQVRQAGLARAAFPWRFHCAKVAAAPFLARLAWSSLGRRSQRPVKGP
MGSEAARQEGAFGSSPHVFRAGPAHHMAAHRAPHSARGSRARPLRDGTVAYWSLRLPIKW
RACPHDAKRA
NT seq
2011 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacatcgacgggctgctggtgctcttcccgcacgactacatctaccccgag
cagttctcctacatgctggagctgaagcggacgctggacgccaagggccacggggtgctg
gagatgccctcgggcaccgggaagaccacctccctcctggcgcccatcccggcctaccgg
caggcttacccgctggaggtgaccaagctcatctactgctccaggaccgtcccggagatt
gagaaggtgattgaggagctgcggaagctggtgcacttccacgagaagcagacggggcag
aagctgcccttcttgggcttggccctcagctccaggaagaacctgtgcatccaccccgag
gtgagcggcctgcgcttcgggaaggaggtggacagcaagtgcttcagcctgactgcctcg
tacatccgggctcagcaccagcaggatggcagtcttccctcttgccgcttctttgaggaa
tttgatgccagcggtcgccaggtgcctcttccttacggcgtctataacttggatgacctg
aaggcctacggtcagcagaagggctggtgcccctacttccttgcccgctactcgatcctc
catgccaatatcgtggtctacagttaccactatctcctcgatcccaaaattgcggacgtg
gtctccaaggagctggccaagaaatcggtggtggttttcgatgaggctcataacatcgac
aacgtctgcatcgactccatgggggtcaacatcacccggaaggtcctggatcgctgccag
gggaacgtggccacgctccaggccgccattcacaggatcaaggaaacagacgcccagaag
ctgaaggaggaatatcagcagctgctgcaggggttgcgggaggccaacgccgcccgggaa
acagacgtctatttggccaacccggtgctgccggacgagatcctgcaggaggccgtgccg
ggcaacatccgcacagcggagcactttgtggctttcctgaagcgcctcctggagtacctg
aagtcccggctgcgcatccaccacgtggtccaggagagccccccgtccttcctgaaggac
atctttgagaaggtctgcattgagcggaagcccctccggttctgtgccgagcggctgcgc
tgcctccttcgcacgctggagatcgcggacatctccgatttctcacccatcaccctcatc
tccaacttcgccaccttggtcagcacttactccaaggggttcaccatcctcatcgagccc
tttgacgacagaacgcccaccatcctcaaccccatcctgcacttcagctgcatggacgcc
tccatcgccatcaagcccgtctttgagcggttccagacggtcatcatcacctcgggaacc
ctttccccccttgacatgtacccccaaatcctggacttccggccggtgaccatggccacc
ttcaccatgacccttgcccggacctgcctctgccccatgattgtgggccgagggaatgac
caagtgaccatcagctccaagttcgaaacccgcgaggacattgccgtgatccgcaactat
ggcaacctcctcctggagatgtcggccgtggtcccggatggcatcgtggccttcttcacc
agctatcagtacatggagaacatcgtggcctcctggtatgagcaggtacgccaggccggc
ttggcccgggctgcttttccctggcgcttccactgcgcgaaagtcgccgccgcccccttc
ctagcccgcctggcctggagcagcctcgggagacggagccagaggcccgtgaaagggcca
atgggaagtgaggcagcccgacaagagggcgcctttggctcctccccgcacgtgttccgc
gctgggcctgcccatcacatggccgcgcaccgggcccctcactccgcacgtggctcccgt
gcccgccccctgcgggacgggacagtagcctattggtcgctgcggctgccgatcaagtgg
agggcgtgcccgcatgacgcgaaacgagcag
DBGET
integrated database retrieval system
