Notechis scutatus (mainland tiger snake): 113427052
Help
Entry
113427052 CDS
T09026
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113427052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113427052
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113427052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Chromo_MIT1
SWI2_SNF2
DUF2683
Motif
Other DBs
NCBI-GeneID:
113427052
NCBI-ProteinID:
XP_026545302
UniProt:
A0A6J1VQD2
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDESFNQGAPDSIEEALGLSGATLDSLAGGSKDQQVTPQP
EPSQPETLPLPDMRPESVIEPPQQDQPGLLQVPQDQEVLSQGNPFMGVSLATTTSMVSPS
SSARDQQATVPPPAPKIVILKAPAGSSMTGAHVAQIQAQPIAAANGGKVTFAKVLTGTPL
RSGVSIISGNAVLATKVSSGAGAPATLHRLVQPGHPVKQLVLQPMKSQAGGNMGAAPLKP
AVTLTSTPAQVSTQFFQGESKRITLVLQQPPTGGNALGQRKVVLGSLPGKIVLQGNQLAA
LSQAKGVPGQPAKVVTIQLQVQQPGQQQQPSGQLGTQKIQLLQPTTAGTSGQQAPLSIPA
VQQGQVVGGSGQRVTVPVKVVLQPQASSSKGSTSGLSVVKVLSSSEVAALPSSSGTTRSS
SDESRKLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPCVRPEETGERKRCRK
GGGERIPKEDRPRKGRGQGGSGKSKGRGKTSTITPVVGKKRKRNTSSDNSDAEVMPAQSP
REEEEASIQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPIKTEQPPAPEPLAPEP
TPEGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPNGQFTEAKEFFVKYKNYSYLH
CEWATIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKD
NGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKCIQSRHPELKRVARPQAGSWKKL
ELSHEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLEEVYNVGIR
GPFLVIAPLSTITNWEREFNTWTEMNTIIYHGSLASRQMIQQYEMYCKDSRGRLIPGAYK
FDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTP
LQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEK
NLAPKQETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPY
LINGAEEKILTEFRDSCHHHVPHDFPLQAMVRSSGKLVLMDKLLPKLKAGGHKVLIFSQM
VRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDLDRFVFLLCTRAGGLGINL
TAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLD
KAVLQSMSGREGSITG
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccatcatggacctcttcgacgatcctaacctctttggcttggactcattg
actgatgagagctttaaccagggcgctccagactccattgaagaggccttggggctttca
ggggccaccctagactccttagcgggaggctccaaagaccagcaggttacccctcagccg
gagccctcccaaccagagaccctgccactccccgatatgcgaccagagtctgtgattgag
ccgccccagcaagatcagccaggccttctacaggtccctcaggatcaagaggttctcagc
caaggcaacccgttcatgggagtctcgttggccacaaccacttcaatggtttcaccctct
tcttctgccagggaccagcaagccaccgtgccccctccggcccccaagatcgtcatcctg
aaagcccccgctggaagctccatgactggtgctcacgttgcccagatccaagctcagccc
attgcggcagccaatgggggcaaagtgaccttcgccaaggtcctgacgggaacccctttg
cgttctggggtctccatcatctcaggcaatgcagtgctggccaccaaagtgtcctctgga
gccggggcacccgctacactccaccggctggtgcaacctggacatcccgtcaagcagctc
gtcctgcagcccatgaagagccaagcgggagggaacatgggggctgctccactcaaacct
gccgtgaccctgacctcgactccagctcaggtgagcacacagttcttccagggcgagtcc
aaacgcatcactttggttctccagcaacccccgactggcggaaatgccctgggacagcgg
aaagttgttttgggcagcttgcctggcaagattgtccttcaagggaatcagctggccgcc
ctaagccaggccaaaggagtgccagggcaacctgccaaggtggtgaccatccagctacag
gttcagcagccgggacagcaacagcaacccagcggccagctggggactcagaagatccag
ctcttgcaaccaaccacagctggcacctctggccagcaggcccctttaagcataccagca
gtccaacaaggccaagtggttgggggctcaggtcagagggtgacggtcccagtgaaagtc
gtgctgcagccacaggccagctcgtccaaaggcagtacctcgggactctcggtggtgaag
gtgctgagcagcagcgaggtggcggccctcccatcctccagtggtacaacacggagcagc
tcggacgaatcccgcaagctggagcatcagaagaagcaggagaaggccaaccggatcgtg
gcagaggccatcgctcgggcccgagccaggggcgagcagaacatccctcgggtgctgaat
gaggacgagcttccctgtgttcggccagaagagacaggagaacgaaagcggtgccggaag
ggcgggggcgagcgcatccccaaagaggacaggccacgcaagggcagaggccagggggga
tccggcaagagcaaaggccgagggaaaaccagcacgatcacgccagttgtggggaagaaa
cggaaacggaatacttcttcagacaattcagatgctgaggtgatgccagcccagtctccg
cgtgaggaggaagaggccagcatccagaaacgacgttcaaaccgtcaggtgaagcgaaag
aaatatacagaagatctggatatcaagatcacggatgatgaagatgacgaggagctggac
gtgaccggccccattaagaccgaacagcccccagctccagaaccacttgctccagaacct
acccctgaaggagagacattgccatcaatgcagttctttgtggaaaacccgagtgaagag
gatgctgccatcgtagacaaagtcctgtccatgcgtgtggtgaagaaggagctacccaac
gggcagttcacagaagcgaaagaattcttcgtgaaatacaaaaactactcttacttgcat
tgtgaatgggccaccattgctcaactggagaaggacaagaggatccaccagaaactcaaa
cggtttaagaccaaaatggctcagatgaggcacttcttccatgaggatgaggagcctttc
aacccagactatgtggaagttgaccgcatcctggatgaatcgcacagcattgacaaggac
aacggggagccggtgatctattatctggtaaaatggtgttcactcccttatgaagacagc
acgtgggaactgaaagaagacgtggacgaagggaaggtccgagagttcaaatgcatccag
tccaggcaccctgagctcaaacgggtggctcgaccccaggcaggttcctggaaaaagctg
gaactttcccatgaatacaagaacggcaatcagttgcgcgaatatcagctggaaggtgta
aactggttgcttttcaactggtacaataggcaaaattgcatcctggccgacgaaatgggg
ttgggtaaaaccatccaatccatcgccttcttggaggaagtgtataacgtgggaatccgg
gggcccttcctggtcatcgcccctctgtccaccatcaccaactgggagcgggaattcaac
acctggaccgagatgaacaccatcatataccatggcagcctggcatcccgccagatgatt
caacaatacgagatgtactgtaaggattcccggggtcgcctgatcccaggcgcatacaag
tttgatgccctgatcaccacctttgagatgatcctgtcggactgtcctgagctgagggag
attgagtggcgttgtgtgatcattgatgaagctcaccgcctgaagaaccgcaactgcaaa
ctgctggacagcctcaagcatatggacctggaacacaaagtgttattgacgggcacccct
ctccagaacaccgtggaagaactgttcagcctcctgcatttccttgaaccctcccagttc
ccctctgaatcggagttccttaaggactttggggacctcaaaactgaagagcaggtgcag
aaactgcaggcgatcttgaagcccatgatgctccggcggctgaaggaggatgttgagaag
aatttggcccccaaacaggaaactatcattgaggtggagctgaccaacatccagaaaaag
tactaccgggccatcctagagaagaacttcaacttcctctccaagggggcggggcacagc
aacatgcccaaccttctcaacaccatgatggagctacgcaagtgttgcaaccacccctac
ctcatcaatggtgccgaggagaagatcttgaccgagtttcgggattcctgccaccaccac
gtgccccatgactttcccctgcaggccatggtgcgttcctctgggaaattggtgctgatg
gataaactgcttcctaaactgaaagccggaggacacaaggtgctgattttttcccagatg
gtccgttgcctcgacatcctggaagactacctcatccaaaagaggtatctctacgagcgt
attgatgggcgggtgcgtggcaatctgcgtcaggccgccattgaccgctttagcaagcct
gatttggatcgctttgtgttccttctctgcacccgggcgggaggtctcggcatcaacctc
acagctgctgatacctgcataatttttgactcagactggaatcctcaaaacgacttgcag
gcacaagctcgctgccaccgcattggacagagcaaggccgtgaaagtttaccgcctcatc
actcggaattcctacgagcgggagatgtttgacaaagccagtctcaagctggggctggac
aaagctgtcctgcagtccatgagcggacgagaagggagcatcactggg
DBGET
integrated database retrieval system
