Notechis scutatus (mainland tiger snake): 113429206
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Entry
113429206 CDS
T09026
Name
(RefSeq) thrombospondin-3-like
KO
K04659
thrombospondin 2/3/4/5
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04145
Phagosome
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113429206
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113429206
09144 Cellular community - eukaryotes
04510 Focal adhesion
113429206
09142 Cell motility
04820 Cytoskeleton in muscle cells
113429206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113429206
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113429206
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113429206
Membrane trafficking [BR:
nss04131
]
Endocytosis
Phagocytosis
Opsonins
113429206
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113429206
Exosomal proteins of colorectal cancer cells
113429206
Exosomal proteins of bladder cancer cells
113429206
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113429206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
113429206
NCBI-ProteinID:
XP_026547509
Ensembl:
ENSNSUG00000012492
UniProt:
A0A6J1W544
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
CLFANPCFAGSKCLNIAPGFRCEPCPLGYKGNLVTGVGADYAKASKQICTDVDECNDGNN
GGCDPNAICTNTVGSFKCGPCKSGFVEKEPGSCTPQKACESPSHNPCDVNGYCLFERNGD
VSCSCNVGWAGNGNVCGRDTDIDGYPDEPLPCIDNNKHCAQDNCRLTPNSGQEDADNDGI
GDQCDDDADGDGIKNVEDNCRLLPNKDQQNSDPDSFGDACDNCPNVPNNDQKDTDQNGEG
DACDNDIDGDGIPNGLDNCPKVPNPLQTDRDEDGVGDACDSCPELSNPTQTDVDSDLVGD
ACDTNEDRDGDGHQDTKDNCVEIPNSSQLDSDNDGQGDDCDNDDDNDGIPDYLPPGPDNC
RLIANPNQKDVDGNGVGDACEEDFDNDTVADPIDVCPESSEVTLTDFRAYQTVILDPEGD
AQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTMTDDDYAGFIFAYQ
DSASFYVVMWKQTEQTYWQATPFRAVAESSLQLKAVKSETGPGEYLRNALWHTGHTPGHV
KLLWKDPRNVGWKDKTSYRWRLLHRPQVGYIR
NT seq
1715 nt
NT seq
+upstream
nt +downstream
nt
tgtttgtttgcgaacccgtgttttgccggctccaagtgcctcaacatcgcgcccgggttt
cgttgtgagccgtgtccacttggctacaaggggaaccttgtcaccggagttggggccgat
tacgccaaagccagcaaacagatttgcacggacgttgatgagtgcaacgatgggaacaac
ggaggttgtgaccccaacgcaatttgcaccaacacagtggggtctttcaaatgtgggccg
tgtaaatccggtttcgtggagaaggagccgggcagctgtaccccccagaaagcgtgcgaa
agtccgagccacaatccttgtgacgtcaacggatattgcctctttgaacgcaatggagat
gtttcctgttcgtgcaacgtaggttgggccggcaacggaaatgtgtgtggccgggacacc
gatattgacggctatccggacgagcctttgccctgcattgacaacaacaagcattgtgcg
caggacaactgccgattgacccctaactcaggacaggaagatgcggataatgacggcatt
ggggaccagtgtgacgatgacgccgacggggacgggatcaagaacgtggaggataactgt
cgtctcctccccaacaaagaccagcaaaactcggacccagattcatttggagatgcttgc
gacaattgtcccaacgttccgaacaatgatcaaaaggacaccgaccaaaacggggaaggg
gatgcgtgtgacaacgacattgatggggatgggattcccaatgggctggacaattgtcct
aaggtacccaacccactgcaaacagaccgcgatgaagatggtgtcggagacgcttgtgac
agctgtccagaacttagcaatccaactcagacagacgtggacagtgatctggtgggagac
gcttgcgacacgaacgaggacagagacggcgatggccaccaggataccaaagacaactgc
gtggaaattcctaatagctcgcagctggattcagataacgacgggcagggcgatgactgt
gataatgacgacgacaacgatgggatccctgactacctgcctccgggtcccgacaactgc
cgcctgatcgctaatcccaaccagaaagatgtcgacggcaacggtgtgggagacgcctgc
gaggaggattttgacaacgacacggtggccgatccgatagacgtgtgtccggagagttct
gaagtgacgctgactgacttccgggcctatcagacagtcatcttggaccctgagggagat
gctcaaattgaccccaactgggtggtccttaaccagggtatggaaattgtccaaaccatg
aacagcgatcccggcttggctgtcggatacacggcattcaacggggtggattttgaaggc
actttccatgtcaacaccatgaccgatgacgattacgccggctttatcttcgcctaccaa
gacagcgccagtttttacgtggtcatgtggaaacaaaccgaacagacgtactggcaggcc
acgcccttccgggctgtggctgagtccagcctccagctcaaggcggtaaaatcggaaacg
gggcccggcgaatatctacgcaatgccttgtggcacacaggccacacacccggccacgtc
aagcttctgtggaaagatcctcgcaacgtaggatggaaagataaaacctcttaccgctgg
cgtctcttgcacagaccccaagtggggtatatccg
DBGET
integrated database retrieval system
