Notechis scutatus (mainland tiger snake): 113431095
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Entry
113431095 CDS
T09026
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113431095 (TRIM56)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113431095 (TRIM56)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113431095 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
PQQ_2
zf-RING_5
RING_XB3-XBAT31
Phytase-like
Motif
Other DBs
NCBI-GeneID:
113431095
NCBI-ProteinID:
XP_026549245
UniProt:
A0A6J1W248
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MAAKESALRDALSSSFLTCTLCLEHYCQPKILPCLHSYCQACLKKLLRGSKRELRCPECR
ELVPLPAGVEGLKTNFFLNGLLDLVPPGEKSRATCSLCPLIGQDASSVAVSHCIDCADHL
CQACARGHRCSRLTHGHLVVDLEAYCSGRYNEEVRKRQASRCREHRDEALQYFCLPCAAA
LCRECRLGPHLEHLCLPLSEAAQARRPVITGLLAGVEEKLQLIAKGKVELAEEVKEMEVY
NRNIRRVAEQMCAKAVEQLLSHKATVLDQLSGYLEERKEASGRLLSELGSQEQVACGTVA
FVQKVLSLGQEEEIVSLEQMISERLRQLQGSSWETLALPVPKLRIQPELLCGSNLFHLEF
HPRAPPEGNMGTAAKLAKKKKARPKPVGGEGGEASRQGRAPNGPEVPPRLVPKPTFFCSF
CAKVPADKKQPQVTGLCPLGSSEILLADEQNKKLKRFSLQGEFKGTVPVPKNVAPFSVAA
VGNKVVFTAGAQLYALNETGGVVWQKALKEGQASHALTTCDRDCVAVSVAGHLEVFNLKG
QFLERIVPEGSHDRSLAFLGRWKEGFVASDGYQRSVVLLSRGGELVAEYQEGQLRDSPPG
SVCVDAPGIVYVVLQELNQVVAFSEAGEELGPFLTAKNSIFQPRVAAVAGEGHFVVALSN
GTVHVFKVKYQGK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaatccgccctccgggacgccctttccagcagcttcctcacttgcacc
ctttgcctggagcactattgccagcccaagatcttgccctgcctccacagctactgccag
gcctgtctgaagaagctgctcaggggctccaagcgggagttgcggtgcccggaatgccgc
gagctggtgcctctcccagccggcgtggaaggtttgaagaccaacttcttcctcaacggc
ctcctggacttggtgcctccgggggagaagtccagggccacctgcagcctctgcccgctc
attggccaagatgccagctccgtcgctgtgtctcactgcatcgattgtgccgaccacctg
tgccaggcctgtgcccgtgggcaccgttgctcccggcttacccacggccacctggtggta
gacctggaggcgtactgctctgggaggtacaatgaggaggtccggaagcgccaggcttcc
cgctgcagagagcaccgggacgaggccctgcagtatttctgcctcccctgcgccgctgcc
ctctgccgggagtgccgcctgggccctcacctagagcacctgtgcctgcccctgtcggag
gccgcccaagcccgccgtcccgtcatcaccggcctcttggctggggtggaggagaagctg
cagctcatcgccaagggaaaagtcgagctagcggaggaggtgaaggagatggaggtgtac
aacaggaacatccggcgcgtggcggagcagatgtgtgccaaggctgtggagcagctgctc
agccacaaggcaacggtcctggaccagctctccggctacctggaggagcggaaggaggcc
tcggggcggctgctttcggagctgggctcccaggagcaggtggcctgcggcacggtggcc
ttcgtccagaaggtgctgagcctgggccaagaggaggagatcgtctccttggagcagatg
atctcggagaggctgaggcagctccagggctcctcctgggagaccctcgcgctgccggtc
cccaagctccgcatccagccagagctcctttgcggctccaacctcttccacctggagttc
cacccgagggcacccccagagggcaacatggggaccgccgccaaactggcgaagaagaag
aaagcaaggccgaagcccgtgggaggggaagggggggaggcctccaggcagggaagggcc
ccaaatgggccagaggtgcccccccgcttggtcccaaagccgacctttttctgcagcttc
tgcgcaaaagtcccagcggacaagaagcagccgcaagtcacgggcttgtgcccgcttggc
tccagcgaaatcctcctggccgacgagcagaacaagaaactgaagcgcttctccctgcag
ggcgagttcaagggcacggtcccggtgcccaaaaacgtggcccccttcagcgtggctgcc
gtgggcaacaaggtggtcttcaccgctggagctcagctctacgccttaaacgaaactggg
ggagtggtgtggcaaaaggccctcaaggagggccaggccagccacgccctgaccacctgt
gacagggactgcgtggcggtgtctgtggcaggacacctggaggtcttcaacctgaaaggg
cagttcctggagaggatcgtgccggagggctcccatgaccgctccctggccttcctgggc
aggtggaaagagggcttcgtggcctccgacgggtaccagcgcagtgtggtgctgctctcc
cggggcggggagctggtggccgaataccaggaagggcagctgagggactctccgccgggc
agcgtctgcgttgatgcccccggcatcgtctacgtggtgcttcaggagctgaaccaggtg
gtggccttttcggaggccggggaggagctgggacctttcctcaccgcaaagaacagcatc
ttccagccacgcgtggccgccgttgccggggaggggcattttgtggtcgctctcagcaac
ggcaccgtccacgtctttaaggtcaagtaccagggcaagtga
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integrated database retrieval system
