Notechis scutatus (mainland tiger snake): 113432113
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Entry
113432113 CDS
T09026
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113432113 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113432113 (CNOT4)
03019 Messenger RNA biogenesis [BR:
nss03019
]
113432113 (CNOT4)
04121 Ubiquitin system [BR:
nss04121
]
113432113 (CNOT4)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113432113 (CNOT4)
Transcription factors [BR:
nss03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
113432113 (CNOT4)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113432113 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113432113 (CNOT4)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113432113 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113432113
NCBI-ProteinID:
XP_026550107
Ensembl:
ENSNSUG00000003330
UniProt:
A0A6J1W467
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTSVVDKNKNKVTSLQRYDVPNSNNKDAWPSLQSSSKSVNGLTMEH
RKTPPILENGTDTEHMTPDGPDSDFGSIDKPSDSLSIGNCDNSQQILNSDTPSPPPGLSK
SNSVIPINSSNHSARSPFEGAITESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPMAP
EPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQ
PSLSPTSLQNPSSHTTTAKGSGSGFLHPATPANANSLNSTFSVLPQRFPQFQQHRAVYNS
FSFPGQATRYPWMAFPRNNIMHLNHTANPSSNSNFLDLNLPPQHSTGLGGIPIADNNSSV
ESLNMKEWQDGLRALLPNININFGGLPNTTSPSNANHSVPTSNTATTDSLNWDSPGSWMD
PAIITGIPASTGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPTQTPHSNPFSTQIPLHR
ASWNPYSPPSNPASFHSPPPGFQTAFRPPSKPPTDLLQSSALDRH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagcccagatgcaaaggaagaccctgttgaatgccccctttgcatggagcct
ctggagattgatgacataaacttcttcccttgcacctgtggttaccagatctgtcgcttc
tgttggcatcgtattcgcacagatgagaatggactttgtcctgcttgtagaaagccatat
ccagaagatccagcagtatacaagccactctcccaagaagagctgcagaggataaaaaac
gaaaagaagcagaaacaaaatgagagaaaacagaagatatcagagaatcgtaagcatctg
gccagtgtacgggttgtacagaagaaccttgtttttgtagtaggtttatcacagcgtcta
gcagatccagaggttttgaaaaggccagaatattttggaaaatttggtaaaatacacaaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgcaagtgcatat
gtaacatatatccggtcagaagatgcactcagagctatacaatgcgttaataatgtggta
gtagatggaagaacacttaaggcatctttaggaaccacaaagtactgcagttattttctg
aagaacatgcagtgtccaaagccagactgtatgtacctacatgaattaggggatgaagca
gccagtttcacaaaagaagaaatgcaggctggcaagcatcaagaatatgaacagaagtta
ctccaagagctatacaaattaaaccccaactttctccagttgtccacaagtgtggttgac
aagaacaaaaacaaagtgacttctctacagaggtatgatgtacccaacagtaataacaaa
gatgcctggccatcattacagagttcaagtaaatcagtcaacggcttaacaatggaacac
aggaaaacgcctcctattttagaaaatggcacagacacagaacacatgactccagatggt
ccagattcagatttcggctctattgacaagccatcagattctctcagtataggaaattgt
gacaactcacaacagatattaaatagcgacacaccatcaccacctcccggtttatcaaaa
tccaattcagtcatcccaatcaattcatccaatcacagtgcacgttctccatttgaagga
gctataacagagtcacagtccctcttctcagacaactttcgacatcccaacccaattcca
agtggactccccccatttcccagctccccacagacgtccagtgactggcccatggcacca
gagccacagagtctcttcacatcagaaaccatcccagtatcctcctctacagactggcag
gcagcatttggatttggttcatccaaacagcaagaagatgacttgggatttgatcccttt
gatatcacccgcaaagccttagcagacctgattgagaaggaactgtcagttcaagatcaa
ccgtctctttcaccaacatctcttcagaatccttcctcacacactacaactgccaaaggg
tcaggatctggatttctgcatcctgctacacccgcaaatgccaattctctcaatagcaca
ttttcagtcttgccacagaggttcccacaatttcaacagcatcgtgcagtttataattcc
ttcagttttccaggccaagcaactcgctatccatggatggccttccctcgcaataacatc
atgcacttgaaccacacagcaaatccctcttcaaatagtaatttcttggacttaaatctc
ccacctcaacacagcacaggtctaggagggattcccatagcagacaacaacagttctgta
gagagtttaaatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaac
atcaactttggtggactgcccaatactacttccccctccaacgccaaccacagtgtacca
acgtccaacactgccacaaccgacagcctgaattgggacagccctgggagctggatggac
cccgcaatcatcacaggtatcccagcctccactggaaacagtttagactctcttcaagac
gacaatccaccgcattggttaaagtctcttcaggctctcacagagatggatggccccagt
gctgccccaacacagaccccccacagtaaccccttcagtacacagattccattgcacaga
gccagttggaacccctattcccctccttcaaaccctgccagtttccattctcctcctcca
ggctttcagacagctttcagaccccccagtaaaccccccacagatttactacagagctca
gcgttggatcgtcattag
DBGET
integrated database retrieval system
