Nitrosomonas stercoris: Nstercoris_00027
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Entry
Nstercoris_00027 CDS
T06172
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nst
Nitrosomonas stercoris
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_00027
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Nstercoris_00027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
TrwB_AAD_bind
AAA_16
T2SSE
AAA
AAA_30
AAA_19
AAA_28
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBL33803
UniProt:
A0A4Y1YLJ1
LinkDB
All DBs
Position
1:complement(19925..21442)
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AA seq
505 aa
AA seq
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MVEPLLIAQRGATQCQLLPELANRHGLITGATGTGKTVTLQLMAERFSRIGVPVFMADVK
GDLTGISQQGQLSSKLADILRERGVPLPEPMACPVTLWDVFGKQGHPLRVTISDMGPLLL
ARMLDLNDTQTGVLNLVFKIADDNGLLLLDLKDLRAMLQYAGDNAKSFTTQYGNISAASI
GAIQRGLLQLETQGGDQFFGEPMLDIEDFIQTVSGQGVINILAADQLMTAPCLYASFLLW
LLSDLFERLPEIGDPEKPKLIFFFDEAHLLFTGAPKVLIERIELVVRLIRSKGVGVYFAT
QNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVRAAASTMRPKAGLNIETAITELAVGEA
LVSLLDAKGRPSETERVYVSLPGSQLGPISDTQRQALIRDSLVAGVYDTPIDRESAYELL
VQQNEQQDTNTRTRSGAHPAVNERDGSLLGEMGSVVKETLFGRAGPRGGQYDGLVQNVVK
GEVRRMGRELLRGALGSLLGGSKRR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggttgagccacttttaattgcgcagcgtggtgcaacgcaatgccagttattgccggag
ttagcgaatcgccacgggttgattactggtgcaaccggaacgggcaagacagtgacattg
cagctgatggcggagcggttctcacgtattggtgtgccggtttttatggcggatgtcaaa
ggagatttgacggggattagccaacaagggcagctcagcagcaaattggcagatatattg
cgggagcgtggggtgcctctgccagagccaatggcttgtcctgttacgttatgggatgtg
tttggtaaacaagggcatccgctgcgggtcaccatttccgatatggggccgctgttgctg
gcgcgcatgctggatctgaacgatacccagacgggcgtgcttaatctggtgtttaagatt
gcagatgataatggtttgctgctgctcgatctgaaagatttgcgcgccatgctgcaatat
gcgggtgataacgcaaaaagctttaccacgcagtatggcaatatcagcgccgccagtatt
ggtgcgattcagcgcggattgctccagctggaaacacaaggcggtgatcagttttttggc
gaacccatgctcgacatcgaagattttatacaaacggtaagtggccaaggggtgattaat
attctagctgcagatcagttaatgactgcaccgtgtttgtatgccagctttttgttatgg
ctattgtctgatttgttcgagcgcttaccggaaattggcgatccggaaaaaccgaagttg
atcttcttttttgatgaagcacatctgttgtttacaggtgcgcccaaggtgctgattgag
cgcattgagttggtggtgcgcctgatacgctccaagggagtcggcgtttattttgccacg
caaaacccactggatattcccgattcagtattggggcagctgggtaaccgtgtgcagcat
gcgttgcgggcatttacgccacgcgaccagaaagcggtgagagcagctgcgagtaccatg
cgtccgaaagctgggttgaatattgaaaccgccattaccgagttggcagtaggggaggcg
ctggtcagcctgctggatgccaaaggacgccccagtgaaaccgaacgtgtttatgtctcg
ctaccaggcagccaacttgggccaattagtgatacacagcggcaagcgcttatccgagat
tcgctggtggcgggtgtatatgacacaccgatagaccgtgaatcagcctatgagttattg
gtgcagcaaaatgagcaacaagatacaaatacccgtacccgatcgggtgcacatccagct
gttaatgaacgggatggcagtttgctgggagaaatgggatcagttgtcaaagaaacgctc
tttggtcgcgctggtccgcgcggtgggcaatatgacggtttagtacaaaatgtggtgaaa
ggcgaagtacgccgcatgggacgtgagttattgcgtggcgctcttggcagtttactaggg
ggcagcaaacgtcgttaa
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