Nitrosomonas stercoris: Nstercoris_00107
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Entry
Nstercoris_00107 CDS
T06172
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nstercoris_00107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_00107
Enzymes [BR:
nst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nstercoris_00107
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nstercoris_00107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
nSTAND_NTPase5
Zn_ribbon_6
AAA_22
zf-CHY
nSTAND6
Polysacc_deac_2
PBDC1
SRP54
SHOCT_2
AAA_19
HypA
Motif
Other DBs
NCBI-ProteinID:
BBL33881
UniProt:
A0A4Y1YLI9
LinkDB
All DBs
Position
1:102531..104732
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AA seq
733 aa
AA seq
DB search
MTIVQVALDVPVDRLFDYLAPDADVADIGRCVHVSFGNRKCGGIILAISHASAIPHNKLK
AVSFIDRDTPALSTSLLKLFEFCSSYYHHPIGQVIANGLPTLLRNPKHQATNQLQHNQEW
VLTETGKNIGLEDISSRSKAKRNIFSKLLENGVITAETYQAMTPYVRKQLRELANLGWVA
QQASSFQKLPFKVTSSFTPTTEQQHAIAKILAHTDTFTPWLLHGITGSGKTEIYLQIAAT
LLAQQKQVLVLVPEINLTPQLEAVFRQRFPTTLLVSLHSGLNHTERLQGWLHAQQGKAGI
ILGTRLAIFTPIPKLGLIIVDEEQDHSFKQQDGLRYSARDLAVYRARQANVPIILGSATP
SLESYQLARSGRYQLLQLHTRAISQATLPTIRCIDTRTAPVSEGFSESILKALDQSLRQK
QQSLVFINRRGYSPVLLCKSCNWIATCGRCSSRLVVHLRNQQLRCHYCGDRQSIMLTCPQ
CGDPDILPLGHGTQRIEATLTKQFPQANILRVDRDSIRQKTAWRTILNTIHRGEADILIG
TQLLAKGHDFPNLGLVCVLNADSSLYSTDFRAEEHLFAQLMQVAGRAGRAHIHGTVLIQT
EFPQHPLYQALTQQDYAAYAQVLLAARKAAYFPPFSYLAVLRAEAPELSEALTFLKQAAD
TATTTEEYDSIQLFDPVPAYMVRLKGLERAQLLIQAASRKRLQIFLDDWYQKIITLPVRG
KLRWHLDVDPLTI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgtgcaggttgcactggatgttccagtggatcgattgtttgattacctcgct
ccagatgcagatgtagccgatattggtcgttgcgtacacgtctccttcggtaatagaaaa
tgcggtggtatcattctagcaatcagccatgcctccgctattccccacaacaagctgaag
gcggttagttttatcgaccgtgatactccagctttatcaacatccttactcaaattattc
gaattttgcagtagctattaccaccaccctatcggccaggtaattgccaacggtttgccg
acactactacgtaatcccaaacaccaagcaaccaatcagttacaacacaatcaggaatgg
gtgttaaccgaaaccgggaagaatattggtcttgaagacatttcgtcgcgctccaaagcc
aaacgcaatatattttccaagttactggaaaatggagtgattacagcggaaacttaccag
gcaatgactccttatgttcgcaaacagctacgcgagctggcaaatttgggatgggttgcg
caacaagcatcctctttccaaaaattgcctttcaaagtcacttcatcctttacgccgact
acagaacaacaacacgccattgccaaaattctggctcatacagatacttttactccctgg
ctactgcatggcatcactggtagcggcaaaacagaaatttatttgcagattgcggcaaca
ttattagcacaacagaaacaagttcttgttttagtgccagaaatcaacctcactccacaa
ttagaagccgtttttcgtcaacgttttcccaccaccttgctggtgagtctacacagtggg
cttaatcacacggaacgcttgcaaggctggttacatgcgcaacaaggaaaagctggcatt
attctgggaacacgcttggcaatttttacccccattcctaaattgggactaattattgtt
gacgaggagcaagatcattcctttaaacaacaagatggattacgctattcagcacgcgat
cttgcagtttatcgtgccagacaagccaatgttccaatcatactgggatcagccactcct
tctctggaaagctatcagctggcacgtagtggtcgctatcaattgctgcaattacatacg
cgagctatcagccaagcaaccctgcccacaattcgctgcattgatacacgtaccgctcca
gtgtcagaaggtttctcagaatctatactaaaagcgctagatcaatcactgcgacagaaa
caacaaagtttggtatttattaatcgacgcggttattcaccggttttattgtgtaaatcc
tgcaattggattgccacctgcgggcgttgctccagccgcttggtggttcatttacgcaac
caacaactacgttgtcattactgtggcgatcgacaatcaattatgctgacatgtccacaa
tgtggtgatccggatattttgccgcttggtcacggtacacagcgaattgaagccacatta
accaaacaatttcctcaggcaaatatcttgcgggttgatcgtgacagcattcgtcagaaa
acagcctggcgtaccatacttaataccattcaccggggagaagctgatattttgattggc
actcaactgcttgccaaaggacatgattttcctaatcttggtctggtatgtgtgctcaat
gccgattcttctttatatagcactgattttcgtgccgaggaacatctttttgcgcaactg
atgcaagtggcgggacgtgctggccgagcacatattcacggcactgttttgatacaaact
gaatttccgcaacatccgctataccaggcgttaacacaacaagattatgcagcatacgca
caagtattgctggctgcacgcaaagctgcctactttccacctttttcttatctggccgta
ttacgcgcagaagcaccagaactctccgaagcgctcacatttctgaaacaggcagctgac
acagccactactaccgaggaatatgacagcatccagctatttgatccggtacccgcttat
atggtgagactcaaaggattagaacgtgcacaattactgattcaggcagcttcacgcaag
cgtttacaaatatttttggatgactggtatcagaaaattataactctgccagtacgtggc
aagctgcgctggcatttggatgtggatccgttgaccatttga
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