Nitrosomonas stercoris: Nstercoris_00204
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Entry
Nstercoris_00204 CDS
T06172
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nst
Nitrosomonas stercoris
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nst03021
]
Nstercoris_00204
Transcription machinery [BR:
nst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nstercoris_00204
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_10
HTH_PafC
KORA
HTH_AsnC-type
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_15
RNase_J_b_CASP
NirdL-like_HTH
HTH_WhiA
Motif
Other DBs
NCBI-ProteinID:
BBL33976
UniProt:
A0A4Y1YIR9
LinkDB
All DBs
Position
1:complement(195279..196124)
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AA seq
281 aa
AA seq
DB search
MNNALTLPVISGGNLENYIYTVNSLPTLSQEEETLLAQKMQKNGDINAAHQLVLSHLRAV
VTIARGYLGYGLPHADLIQEGNIGLMKAVRRFDPERGVRLISYAVHWIKAEIHEFIMRNW
RLVKIATTKPQRKLFFNLRSMKKGLDTMNQAEVAEMAEQLGVKAEEVIEMETRFSGRDIS
LEPLTTDHEEENFSPIAYLTDGSDPARELEQEQLEQLTHAKLKDSLDSLDERSRRIIEAR
WLQEGKAATLHELAEEFGVSAERIRQIEAKAMKKMRTEITV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgctttaactttaccggtgataagcggaggaaatctggagaactatatctac
acagttaatagtttgcctacgttatcacaagaggaagaaacactacttgctcaaaagatg
caaaaaaatggtgatattaatgctgcacatcaattggtactttctcatttgcgtgcggtg
gtaacaattgcacgtggctatttgggctatggattgccgcatgctgatttaatacaggaa
ggtaatattggcttgatgaaagcagtcaggcgctttgatccggaacgtggcgtgcggctg
atttcttatgctgtgcactggatcaaggcggagattcatgaattcattatgcgtaactgg
cgcttagtaaagattgcaacaaccaagccacagagaaaattattctttaatttgcgcagc
atgaaaaaaggtctggatacaatgaaccaggcagaagtagcggaaatggctgagcaactt
ggcgtcaaggctgaggaggtgattgaaatggaaactcgtttcagtggccgagatatttcg
ctcgaaccgctgacaaccgaccatgaggaagaaaattttagcccgatagcctacttaaca
gatggatcggatcctgccagagagttagagcaagaacagctcgaacagctaacacatgca
aaattgaaagattcactggatagtttggatgaacgtagtcgtcgtattattgaggctcgc
tggttgcaagaaggcaaggctgcaaccttacacgaattggccgaagaatttggtgtgtct
gctgagcgaatacgtcaaattgaagccaaggcaatgaaaaaaatgcgaactgaaataacg
gtttag
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