Nitrosomonas stercoris: Nstercoris_00251
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Entry
Nstercoris_00251 CDS
T06172
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nstercoris_00251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_00251
Enzymes [BR:
nst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Nstercoris_00251
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nstercoris_00251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
T3SS_needle_F
Motif
Other DBs
NCBI-ProteinID:
BBL34022
UniProt:
A0A4Y1YIV5
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All DBs
Position
1:240045..243620
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AA seq
1191 aa
AA seq
DB search
MSAGSFNNGFMVIHGNQPEWLRQLLIHWFKAHPLHPLEDEIILVQSNGIAQWLKLALAQN
TADDPSSSGGCGIAAALEILLPARFIWRVYRAVLGADAVPDTSSFDKSFLIWRLMRLLPK
VTLQLGYEPLARFLEADNDLRKRYQLATKIADLFDQYQVYRADWLTAWANGDDILYNAHH
IARPLATQHSWQAMLWRALLADAGTTDQSSRATVHANFLAACQQLEHRPAELPRRITVFG
LSSLPRQSLEVLLAISRITQVILCVHNPCEYYWTDLLTEQDHARRTSRRHARKKNAPATI
TEEMLHLHAHPLLAAWGKQGRDYIALLDELDQPDTYRPLFEQANERIDLFHSHGDSTLLN
QLQDDIRLLRTVAETRATWPPVDPAQDYSIRFHCAHSMQREVEIVHDQILAALNADATLR
PRDIIVMVPDVNSYAPHIEAIFAQIDPSDARYIPFSIADLTQRQQIPLISALEFLLHITE
ARLTANELLDLLNVPAVRQRFGLTETDLPQLHQWIRQTNIRWGLHNKHRAQFIPSQTQSQ
QRNEQNTWLHGLKRMLLGYATGYDPTGRADYSWHDIEPYGEISGLEATLVGALSHLLLQL
EILLQTFTAPASPTIWGQRLQSLLQNFFQTEHPSDTALLLQLQTSLQTWLETCTSTHFTE
AIPLAIVREHWLNQIDQPNLTQRFMLGTLTFATLMPMRAIPFRMVCLLGMNDSEFPRVHP
PVDFDLMAQDIRPGDRSRREDDRYLFLEALLSAREKLHISWIGKNILDNSDLPPSVLVSQ
LRDHIAAGWQLATSTTSTSTSNEDLLAALTVEHKLQAFNQDYFGSESSTASPFFTYAREW
ERNAACTPAAHLPSSPLPPAILEHPLSLGQLAAFLKNPVQTFCRERLGIYYEIDILEHED
HEPFVLDGLNQWLLQDELIQVRLDAIQHGHDETAAMTQQFARIQRRGELPLGEMTTLLTR
SLSAPLDEMFTRYREINAAWPHPLEDQTFEYVYHTTEGATYTIQDSITQYYGNDHSQQLC
RIELNSSDILTNKKPRYDKLLSVWLLHLAAHLNGQSLTTYIIGKDGQTVIPPLAFETAQQ
YFDAIIAAYLGNLRAPLPLAPKTGFAWLKKQGTPVTGSPFDTDQHDAVHAVRKHYEGDDY
QQGEVTQNAYLQRFYPTFTQLWSNGTFTQLCETLYAPLMRHLSQSQASKAN
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgcaggatcatttaataacggcttcatggtgatccatggcaatcaaccagagtgg
ttgcggcaattactgatccattggttcaaggcgcatccactgcacccattggaagacgaa
attattctggtgcaaagtaacggcattgctcaatggctgaagctagcactggcacaaaat
actgccgatgatcctagtagtagcggtggctgtggcattgctgctgcgctagaaatactg
ttacctgcgcgttttatctggcgagtttatcgcgcagtactgggcgcagacgctgtacca
gatacctcttcttttgataaatcttttttaatttggcgcttgatgcgcctgttacccaag
gttactttgcagcttggttatgaaccgctggctcgttttctggaagcagacaacgatctg
cgcaaacgctatcaactagccaccaaaatcgctgatcttttcgatcagtatcaagtttat
cgggcggattggctaacagcctgggccaatggtgacgacatactgtataacgcgcatcat
attgcccgcccgctagctactcaacacagttggcaagctatgttatggcgcgccttgttg
gcggatgcaggaaccaccgatcaaagcagtcgtgctactgtacatgcgaattttctcgct
gcttgtcaacaactggaacatcgtcctgcggaactaccacgacgcataacagtatttggt
ctatcttccttgccgcgccaatcgctagaagtattgctggcaatttcacgtatcacgcaa
gtcattttgtgcgtacacaatccttgtgaatattactggactgatttactgactgaacaa
gatcatgcacggcgcacttcgaggcgtcatgctcgcaaaaaaaatgcaccagccactatc
actgaagagatgctgcacctacatgcccacccgctgctggctgcgtggggtaaacaagga
cgagattacattgctctactggatgaattagatcaaccagatacttatcgtcctttattt
gaacaggccaatgaacgcattgatttgtttcatagccacggtgacagtacgctactcaat
caattacaagatgatattcgcctgttgcgcaccgtagcagaaacgcgcgccacctggccg
ccagttgatcccgctcaggattattccatccgctttcactgtgcacatagtatgcagcgc
gaagtcgaaattgtgcatgatcaaatattagctgcgctcaatgcagatgccaccttgcgc
ccccgcgatattattgtcatggtgcctgatgtcaacagttatgcgcctcacattgaagcc
atatttgcacagattgatcccagtgatgcgcgctatattccattttcaattgcggatctc
acacaacggcaacaaattcctcttatttctgcactagaatttttattgcatatcacggaa
gcacgtctcactgctaacgaactactggatttactcaacgtaccggctgttcgccagcgc
tttggcttgactgaaacagacttgccccaattacaccaatggattcggcagaccaatatt
cgctggggattacacaacaaacatcgcgcacaatttattccaagccaaacacaatcccaa
cagagaaatgagcaaaatacatggctacacgggcttaaacgcatgttgctgggctatgca
acaggatatgatcccactggacgagcagattacagttggcatgatattgaaccttatgga
gaaatttcgggattggaagctactctagttggggcactatctcatctgttactccagcta
gaaatactcctacaaacctttaccgcccccgcctcccccaccatttggggacaacgctta
caatcactgctgcaaaatttctttcagactgaacatcccagtgataccgcgttgctatta
cagttacaaaccagtttgcaaacctggttggaaacctgcaccagcactcactttacagaa
gctattcctttagcaatcgtccgtgaacattggctgaaccagattgatcaacccaatctg
acacaacgttttatgttgggcacattaacttttgccaccctcatgcctatgcgtgctatt
ccttttcgcatggtttgtttgttgggaatgaatgatagtgaatttccgcgtgtacatcct
ccggttgattttgatctcatggcacaagatatacgaccaggagatcgctctcgccgcgaa
gatgatcgctatctttttctggaagcgctgctttccgctcgagaaaaactgcacatcagc
tggattggcaaaaacatactggataactccgatcttcctccgtcagtactcgtcagccag
ttacgagatcacattgctgccggctggcaattggctacatcaaccacatccacctccacc
tcaaacgaggatttgctcgcagccctcacagttgaacacaaactgcaagctttcaaccaa
gattactttggatcagaatcttccaccgcctctccgttcttcacttatgcacgagaatgg
gaacgcaacgccgcttgcacgcctgctgcccatttaccttcctcacctttgccgccagca
attctcgaacatcccctttcgcttggacaacttgctgcttttctaaaaaatcctgtacaa
accttttgtcgcgagcgcttgggtatctattacgaaatagatattttggagcatgaagat
cacgaaccttttgtactggatggactgaatcaatggttattgcaagacgaactcatccaa
gttcggctggatgctatccagcacgggcatgatgaaacagccgcaatgacacagcaattt
gcacgcattcagcgacgcggcgaactgccattgggtgaaatgaccacattgctcacccgc
tccttaagcgctcctttggatgaaatgttcacgcgttatcgtgaaatcaacgcagcgtgg
ccgcatcctctggaagatcaaacatttgaatatgtttatcacacgacagaaggcgccacc
tacaccatacaagatagcattacgcaatattacggcaacgaccatagccaacagttgtgc
cgcattgaactaaattccagcgatatcctgaccaacaagaagccacgctatgacaaatta
ctatctgtctggctcttgcatctggcagctcatcttaacggtcaatcgctaaccacctat
attattggcaaggatggacaaacggttattcctccgctggcatttgaaactgcacaacaa
tattttgatgccatcatcgctgcctatctcggaaatctccgcgcgcccctgccactagca
cccaaaactgggttcgcttggctgaagaaacaaggtacaccagttaccggctcaccattt
gacactgatcagcacgacgctgtgcatgctgtacgtaaacactacgaaggagatgattac
caacaaggtgaagtaacgcaaaacgcctatttacaacgcttttatccaacttttactcaa
ttatggtcaaacggcactttcacacagctatgtgaaacattatatgccccattaatgcgc
catctctcgcaatcccaggcaagcaaagcgaattaa
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