Nitrosomonas stercoris: Nstercoris_00253
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Entry
Nstercoris_00253 CDS
T06172
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nstercoris_00253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_00253
Enzymes [BR:
nst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Nstercoris_00253
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nstercoris_00253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
T2SSE
SLFN-g3_helicase
AAA_28
nSTAND3
AAA_7
AAA_16
NTPase_1
AAA_29
AAA_5
NACHT
Motif
Other DBs
NCBI-ProteinID:
BBL34024
UniProt:
A0A4Y1YJ60
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All DBs
Position
1:247346..249430
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AA seq
694 aa
AA seq
DB search
MRTQPTITQQQALTLLENWATQGLLRELDLALVRFLQAEVPAMEPALMLATALTSYQLGQ
GHVCLDLQQVLGNPAATLTLSLDKNNPTLMADVQYLKEQLAAWQAADWHIAPQQAKLINH
GAGNTPLVLVKQRLYLRRYWRYERQIETAIQQRLLSSQQLLDHPSAAEFREKLDALFPPA
PLTTQQANTTTTDWQKIAGALAAHSNFSLITGGPGTGKTTTVVRLLALLQSNALAENPTR
PLTIRLAAPTGKAAARLQEAITGAIDKLPAFVQANSLLQAHIPNTVTTLHRLLGARPNTR
LFRHHARNPLLLDVLVIDEGSMIDLEMMASVLLALPTHARLIILGDKDQLASVEAGSVLG
ALCQRAHQGHFLPETIRWIEATTGEHIDPALQDANGLPLDQHIVMLRTSRRFTDDSGIGQ
LAQAVNSGDLQTMAAIWQQDFHDLYRYDLPDLTDKRLQTILFGQMPQQNRPPGIIDYLHI
IKTAHPPLEADKAAFDAWAQQILQTHSHFQLLCVLRDGPFGVSGLNHHIETLLANQQMIQ
PDGIWYEGRPILITRNDYALGLMNGDIGITLSYPTHNQATNTLEWGLRVAFIREDGSDTI
RWIAPSRLQNSETVFALTIHKSQGSEFEHCALLLPSEPNPILTRELIYTGITRGKRWLSL
ICINNHNIINQAVTRTVQRSGGLFAENSHITTDC
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccaaccaactatcacacagcagcaagcactgactttgcttgaaaactgggcc
acgcaaggtttgttgcgcgaactggatctggctttggtacgttttctgcaagccgaagtg
ccggctatggaaccagcactcatgttagccaccgccttaaccagctatcaattgggacaa
ggtcatgtgtgtctggatttgcagcaagtgttggggaatccagcggcaactcttacgcta
tcactcgataaaaacaatcccactttaatggccgatgtgcaatacctcaaagaacaatta
gctgcctggcaagcagcggattggcatatcgcaccgcaacaagcaaagttaattaatcat
ggagcaggcaacacaccattagtgttagtcaaacagcgcctttacctgcgccgctattgg
cgttatgaacgtcagattgaaacagctattcaacaacgattgctcagtagccagcaactg
ctcgatcatccctctgcagctgaatttagagaaaaattagacgcactttttccgcctgcc
ccactcacaacacaacaagctaatactacaacgactgattggcaaaaaattgctggtgca
ctggctgctcacagtaatttcagcctcattactggtgggcctggcactggcaaaactacc
acagttgtacggctgctggccttgttgcaatctaacgctttagctgaaaacccaactcgc
cctttaactattcggctcgctgcccccaccggcaaagcagcagcgcgcttgcaagaagca
attaccggtgcaatcgacaaattgcctgcttttgtccaggctaattccttattacaagca
catattcccaatactgtcaccacgctgcatcgcttgctcggtgctcgccccaatacccgg
ctgtttcgccatcatgcgcgtaatccactgttgcttgacgtgctggtcattgatgaaggt
tctatgatcgatctggaaatgatggcctctgtcctgctggcgctgcctacgcatgctcga
ctcattattttgggtgataaagatcaactggcttccgttgaagccggttccgtactgggt
gccttgtgccaacgtgcacaccaaggccattttctgcccgaaacaattcgctggattgaa
gcaactaccggagaacatattgatcctgcactgcaagatgccaacgggttgccacttgat
cagcatatcgtgatgttacgtacaagtcggcgctttacagatgacagtggaatcggacaa
ttggcacaagctgtcaatagtggagatttgcaaaccatggctgctatctggcagcaagat
tttcacgatttataccgttacgatttacctgatctgacagataaacgcttgcaaaccatc
ttgttcggtcagatgcctcaacagaatcgtccacctggcataattgattatttacatatc
atcaaaacagcacatcctccactggaagctgacaaagctgcgttcgatgcctgggcacag
caaatattgcaaacacacagtcatttccagttgctgtgtgtacttagagatggcccattt
ggcgttagtggtttaaatcaccatattgaaacgttgctagccaatcaacaaatgattcag
cctgatggcatctggtatgaaggacgccctatccttattacccgcaacgattatgcactt
ggcctgatgaatggtgacattggcattacacttagctatccgacacacaaccaggctacc
aatacgctggaatggggtttgcgcgttgcctttatcagggaagatggtagtgacactatt
cgctggattgctcccagccgtcttcaaaacagcgaaactgtttttgccctaacgattcac
aaatcacaaggttccgaattcgagcattgtgcattgctcctaccctcagaacctaacccc
atcctgacacgtgaacttatttataccggtattacccgtggcaaacgctggctatctctg
atctgtatcaacaatcacaacatcatcaatcaggcagttacccgcactgtgcaacgttct
ggcggtttgtttgctgaaaacagccatataactactgactgctag
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