Nitrosomonas stercoris: Nstercoris_00865
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Entry
Nstercoris_00865 CDS
T06172
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
nst
Nitrosomonas stercoris
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
P-loop_SecA
Cas3-like_C_2
PSK_trans_fac
Motif
Other DBs
NCBI-ProteinID:
BBL34626
UniProt:
A0A4Y1YKJ8
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All DBs
Position
1:complement(884248..887145)
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AA seq
965 aa
AA seq
DB search
MTHSWQYSTVHNSACKVIEEQTLWGQTVCRVWLPNQDAVVRVPRSALRPLTADLRPEIEA
GRIAYVAAAAKVAEVLEGSTSATDGHVLLAPMESNVIPLPHQIHALSRAISGDRVRYLLA
DEVGLGKTIEAGLVMRELKLRGLVRRTLVVSPKGIATQWVAEMQTHFNEQFQLVLGDDIG
TLQRLAPGADHRSSAWSMFDQVIVSLDSVKPMDKRRGWTAERVAEYNRSRFEDLITAGWD
LVIVDEAHRLGGSTDQVARYKLGKGLAEAAPYVLLLSATPHQGKTDAFHRLMNLLDDDAF
PDMDSVSRERVAPYVIRTEKRKAIDADGKPLFKPRRTQMAPVAWESRHQLQRLLYEAVTD
YVREGYNQALREKKRHIGFLMILMQRLVVSSTRAIRTTLERRLAALKDGEQQASLRLAEL
ENGAEESESPDDEMAELYDMDGQELLDELLKSHVSALQSEGSHVETLLEAAVRCEQAGPD
AKAEALIEWIYKLQAEENEPDLKVLIFTEFVPTQQMLKEFLEARGISVVTLNGSMAMEER
GAAQDAFRKSHRVLVSTDAGGEGLNLQFAHVIINYDIPWNPMRLEQRIGRVDRIGQPKKV
RAINFVFEDSVEFRVREVLEQKLSVILEEFGIDKTGDVLDSAQAGELFEDVFASAILNPD
GIETSVDHTVARIRDEIQQVRESSAIYGISEEPDVQAAERLRSHPLPHWVERMTVGYLNS
HGGAASRKRSWWDLNWPDGQEHRKAVFNAREADRLTDATLLNLENSRVRGLALNLPQIAA
GQPLPCVTVSGLPASISGFWGLFEIRLQAGMHQKTQLLRIPMVRRGYVSVFLSEEGKLFL
PTARHIWDALQTAEAQMQTTLGQNESITAHENLQIAAEQAGQELFDALQQAHIVSVTREE
ERGMVAFASRRKAIERVGLPEVRQYRLARCDAEEAEWRHELQSARQIVPEIRSLLMLRII
KGGAQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgacacattcttggcaatacagcaccgttcataacagcgcctgcaaggtcatcgaagaa
cagaccttgtgggggcagacggtgtgccgtgtctggttgccgaaccaggacgcggtggtg
cgcgtgccccgctccgctttgcggccgctgactgccgacctgcggccggagatcgaggcc
ggacgcattgcctatgtggccgccgcagccaaggtggccgaggtgctggaaggctccacc
agtgccaccgacggccatgtattgctggctcccatggagtccaacgtcattccgctgccg
caccagatccacgccttgtcccgggccatctccggcgaccgcgtgcgctacctgctggcc
gacgaggtgggtctcggcaagaccatcgaggcaggtctggtcatgcgcgagctcaaactg
cgcggactggtgcgtcggacattggtcgtctcgccgaagggaatcgctacccagtgggtg
gcggaaatgcagacccacttcaacgagcagttccagctcgtgctgggcgacgacatcggc
acattgcaacgcctggctccaggggcggatcaccggagctcagcctggtcgatgtttgat
caggtcatcgtctccctggattcggtcaaacccatggacaagcggcgcggctggaccgcc
gagcgcgtcgccgaatacaaccgcagccggttcgaggatctgattaccgccggttgggat
ctggtgatcgtggacgaagcgcatcggctgggcggcagtaccgaccaggtcgcccgctac
aaactcggcaaggggctggcggaagccgcgccctatgtgttgctcctttcggctacaccc
caccaggggaagaccgatgccttccatcggctgatgaacctgctggatgacgatgccttt
ccggatatggacagcgtctcccgtgagcgggtggctccgtatgtcatccgtaccgagaag
cgcaaggccatcgatgccgacggcaagccgctcttcaaaccccggcggacgcagatggcc
ccggtggcctgggagagccgtcaccaactgcagcggcttctctacgaggcggtgaccgac
tatgtgcgcgagggctacaaccaggccctgcgcgagaagaagcgccacatcggctttctg
atgatcctgatgcagcgcctggtggtttccagcacccgggcgatccgcaccacgctggaa
cgtcggcttgcggcgcttaaggatggcgaacaacaagccagcctgcgcctggcggaactg
gaaaacggcgcggaggaatcggaaagcccagacgatgaaatggccgagctatatgacatg
gacggccaggagctgctcgatgagctgctgaaatcccatgtgtcggctctgcagagcgaa
ggaagccatgttgagaccctgctcgaagcggcggtccgttgtgagcaggcgggtccggat
gccaaggccgaggctctgatcgagtggatctacaagctgcaagccgaggaaaacgaaccg
gatctgaaggtgctgatcttcaccgagttcgtgccgacccagcagatgctgaaggagttt
ctggaagcccgaggaatctcggtggtcaccctgaacggctccatggccatggaggaacgt
ggggcagcccaggatgccttccgcaaatcgcaccgcgtgctggtttccaccgacgcgggc
ggtgagggtctgaacctgcagttcgcccatgtcatcatcaactacgacatcccctggaac
ccgatgcggctggaacagcgaatcggccgtgtggaccgtatcgggcagcccaagaaggtg
cgggcaatcaatttcgtgtttgaggattcagtcgagttccgggtccgcgaagttctggag
cagaagctctcggtgatcttggaggagttcggcatcgacaagaccggcgacgtactcgac
tccgcccaggccggtgagctgttcgaggatgtgttcgcctcggccattcttaatcctgac
ggtatcgaaacctccgtcgatcacacggtggccaggattcgggatgagattcagcaggtg
cgcgagtcctccgccatctacggcatatccgaagagccggatgtgcaggcggctgagcgt
ctgcgttcccatccgctgccccattgggtggaacggatgacggtcggctacctcaactcg
cacggcggtgcggccagccgtaaacgttcctggtgggacctgaattggccggacggccag
gaacatcgcaaggccgtgttcaacgcccgggaggcggatcgtctgaccgacgcaaccctg
ctcaatcttgaaaacagccgtgtccgcggcctggccctgaacctgccacaaatcgcagct
gggcagcctttgccgtgcgtaaccgtaagcggattgccagccagcatctccggattctgg
gggctctttgaaatccgccttcaggccggaatgcaccaaaagacacaacttctgcgcatc
cccatggttcggcgtggttatgtcagcgtgttcttgagcgaggaaggcaaactgtttctg
cccacggcccgacatatctgggatgcgctgcagacagcggaagcacagatgcagaccacc
ctcggccagaatgaatccatcaccgcccatgagaacttgcagatagctgccgaacaggcc
ggacaagagctgttcgacgccctgcagcaggcgcacatagtttcggtgacccgggaagaa
gaacgcggcatggttgctttcgcttctcggcggaaggctattgagcgagtggggttgcct
gaagtacgccagtaccgtcttgcccgctgtgatgccgaggaggctgagtggcgacatgaa
ctgcaatcagcgcggcagatcgttccggaaatccggtcgctgctgatgctgcggatcatc
aagggaggcgctcaatga
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