Nitrosomonas stercoris: Nstercoris_00975
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Entry
Nstercoris_00975 CDS
T06172
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nst
Nitrosomonas stercoris
Pathway
nst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nstercoris_00975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nst03021
]
Nstercoris_00975
03019 Messenger RNA biogenesis [BR:
nst03019
]
Nstercoris_00975
Transcription machinery [BR:
nst03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Nstercoris_00975
Messenger RNA biogenesis [BR:
nst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Nstercoris_00975
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
S1CSD-TOTE-2
NACHT
ATPase_2
Mor
AAA_22
AAA
nSTAND_NTPase7
Motif
Other DBs
NCBI-ProteinID:
BBL34733
UniProt:
A0A4Y1YPF8
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All DBs
Position
1:complement(1007414..1008673)
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AA seq
419 aa
AA seq
DB search
MRLSDLKSIHVSELVKMAVSSNIDGANRMRKQDLIFALLKNQARKGESIFGEGTLEILQD
GFGFLRSPDTSYLAGPDDIYISPSQIRRFNLHTGDSVDGEIRPPKDGERYFALVKIDKVN
NEPPENSKRKILFENLTPLFPTERLTLERDIKSEANITGRIIDLIAPIGKGQRGLLVASP
KSGKTVMLQHIAHSISANHPDVVLMVLLIDERPEEVTEMVRSVKGEVISSTFDESASRHV
QVADMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIYPAINV
NRSGTRREELLIPADVLQKTWILRKLLYPMDEMDAMSFLLDKIKATKNNADFFDSMRRV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttatctgatttaaaaagcattcatgtctccgaattagtaaaaatggccgtctcc
agcaatatagatggcgcaaaccgaatgcgcaaacaagacttaattttcgccctattgaaa
aatcaggcgcgcaaaggtgaaagtatatttggagaaggcacactggaaattttgcaggat
ggctttgggtttttacgctctccggatacatcctatctcgctggtcctgacgatatttat
atctctcccagccaaattcgtcgctttaacttgcacacaggtgattctgtcgatggggaa
atacgccccccaaaggatggggagcgctattttgcactggtcaaaatagataaggtcaac
aatgaacccccagaaaattccaagcgcaaaattctgtttgaaaatttaacacctcttttc
cccactgaacgccttacactagaacgtgatatcaaatctgaggcgaatatcactggtcgc
atcattgatttgattgcacccattggaaaagggcaacgtggattactggttgccagcccc
aagtcgggtaagactgttatgttgcaacatattgcgcattctatttctgctaatcaccca
gatgttgtattgatggtgctcttgattgacgaacgtcctgaagaggtcacggaaatggtg
cgctcggtcaagggtgaagtaatctcttctacctttgacgaatctgctagtcgccatgtg
caggtagcggatatggtgatcgaaaaagcaaaacgcttagttgaacacaaaaaagatgtc
gtgatcctgcttgactcgatcacacggcttgcgcgagcgtataatacggtagtaccctcg
tctggtaaggtattaactggtggtgttgatgcgaatgcattacaacgccctaagcgtttt
tttggtgcagcgcgcaatattgaagaaggtggatcactgactattattgctactgcgttg
gttgataccggttcacgtatggatgatgtgatttatgaagaattcaagggaaccggcaat
atggagatacacttggatcgccgtatggcagaaaaacgtatttatcccgccatcaacgtg
aatcgttcgggaacacgccgtgaagagttattgatacctgctgacgtattacaaaagacc
tggattctgcgtaagttattgtacccaatggatgaaatggatgctatgtcgtttttgctt
gataagattaaagcgactaaaaataacgcagatttttttgattctatgcgccgtgtatag
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