Nitrosomonas stercoris: Nstercoris_01349
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Entry
Nstercoris_01349 CDS
T06172
Name
(GenBank) Holliday junction ATP-dependent DNA helicase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03030
DNA replication
nst03430
Mismatch repair
nst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nstercoris_01349
03430 Mismatch repair
Nstercoris_01349
03440 Homologous recombination
Nstercoris_01349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nst03032
]
Nstercoris_01349
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_01349
Enzymes [BR:
nst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nstercoris_01349
DNA replication proteins [BR:
nst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nstercoris_01349
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nstercoris_01349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_30
PIF1
ResIII
Rad17
TIP49
AAA_18
nSTAND3
AAA_assoc_2
AAA_7
Mg_chelatase
AAA_2
AAA_19
TsaE
Herpes_Helicase
AAA_28
AAA_24
RCF1-5-like_lid
VapE-like_dom
RNA_helicase
SKI
Motif
Other DBs
NCBI-ProteinID:
BBL35093
UniProt:
A0A4Y1YQH7
LinkDB
All DBs
Position
1:1360171..1361754
Genome browser
AA seq
527 aa
AA seq
DB search
MTASQALARKWRPKDFAKLVGQEHIVKALVNSIEQNRLHHAYLFTGTRGIGKTTIARILA
KALNCELGPTTTPCGKCTACQSIDRGNFVDLIELDAASNTQVDAMRELLDNTQYAPVAAR
YKVYLIDEVHMLSKSAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNLKQIP
ASLIVTRLSEILAAEEVSADATALKLLAKAAKGSLRDALSLLDQAIVFSNAAIDEKNMRA
MLGALDQDYLFALLEALAKHDGSALFTVVDQLETAGASFDQILQDLAALLHQLAMVQILP
QMFADEQPETSRLLAVAQLFTPEDIQLFYQIVLHGRSDLDYAPDEYSGFTMTLMRMLAFI
PHTQHVVEAGQTASAVISSPEIKSESSDRPAVPRQIKENSTPNTAWLALVDQLPLKGMTK
MLAQYSEAKYFSTDKIELCVAETHKHLLDKTYQGKLKSQLESHFGKPIEINFSLGGVAGM
TPAAQLERNKQEKQSQAVDAIESDPYIRELVDQFDAKLNISSIKPIN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcttctcaagcgcttgccagaaagtggcgtcccaaagatttcgcaaagttagta
gggcaagagcatatagtaaaagcattggttaactcgattgaacaaaatcgattacatcat
gcttatctattcactggtacacgcggtattggtaagacgacaattgccagaattctagcc
aaggcacttaattgtgaactaggaccaaccacaacgccatgtgggaaatgtactgcctgc
caatcaattgatcgtggaaattttgttgatttaattgagttggatgctgcatccaatact
caagttgatgcgatgcgtgagttattggataacacccaatatgcacctgttgccgcgcgg
tacaaggtttatctgattgatgaagtgcatatgctttccaagtcggcttttaacgccatg
ctcaaaaccttggaagagccaccagaacatataaaatttattttggcaacaacagatccc
cagaaaattcctgttactgttttatcgcgttgtttgcaatttaatctaaaacagatccct
gcttctttaattgttacccgtttgtcggaaattcttgctgccgaagaggtatctgcagat
gctacagcgttgaaattattggcaaaggctgccaagggaagtttgcgtgatgcattaagt
ttgcttgatcaggcaattgtattcagtaatgcagcaattgatgagaaaaacatgcgtgcc
atgttgggcgcattagatcaggattatttgtttgctttgttggaagcattggcaaagcac
gatggatcagcgctgtttacagtggtcgatcaactggaaacagcaggagcgtcatttgat
caaatcttgcaagatttagcagcattgctgcatcaattagcaatggttcaaattctccca
cagatgtttgctgatgagcagccggaaaccagtcggttacttgctgtggctcagcttttt
acgcctgaagatatccaactattttatcaaattgtattacatgggcgcagtgatctcgac
tacgcgccagacgaatacagtggttttaccatgacgttgatgcgcatgctggcctttatt
ccacatacccaacatgtggtagaggcagggcaaacagcgagtgctgttatttcttcccct
gagatcaaatccgagtcttcagatcgacctgctgtgccaaggcagatcaaagaaaattct
actccgaatactgcctggttagcgttagttgatcagctaccgctaaaaggaatgacgaag
atgctagcgcaatatagtgaggcaaagtacttttccacagataaaatagaattatgtgtg
gcggaaacacacaaacatttgctggacaaaacctatcaaggtaagttgaaatcacaacta
gaatctcatttcggaaaaccgattgaaataaatttttcgttagggggtgtagctggaatg
acaccagctgcacagctagagcgaaataagcaagaaaagcaatctcaagctgtggatgcg
attgaatctgatccttatattcgcgaactggttgaccaatttgacgcgaaattaaatatt
tcttccattaaacctattaactaa
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