Nitrosomonas stercoris: Nstercoris_01663
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Entry
Nstercoris_01663 CDS
T06172
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Nstercoris_01663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_01663
Enzymes [BR:
nst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Nstercoris_01663
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Nstercoris_01663
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nstercoris_01663
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nstercoris_01663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BBL35398
UniProt:
A0A4Y1YNK7
LinkDB
All DBs
Position
1:1683830..1685290
Genome browser
AA seq
486 aa
AA seq
DB search
MQTASFTFYWHDYETFGTNPRWDRPAQFAGLRTDEALNEIGEPLVIYCQPARDRLPHPEA
CLLTGITPQLAAAQGLLEPEFVALIHTQLAQPGTCGVGYNSLRFDDEVTRFALYRNFYDP
YAREWQASNSRWDVIDLARMAFALRPEGIAWPYNAEGHPSFRLEDLTAENGLVHDSAHDA
LSDVRATIALARLFKNQQPRLYDWLFRLRNKRAAADLLDLAQHTPVLHTSRMYPAKYGCT
TLIMPLLFEAGNANNILAYDLRYDPSEFMTLSADALAERLFTSQEELAGQQRLPVKAVRL
NKCPALAPQTVLTEEIAQRIELNIERCLHHWQQLRDHPEFMQRIEHAYSDNRVFAKNDAE
LALYDGFASNQDRNLFSRVQHSDPKNLAELGGEFQDSRYVELLFRYRARYYPETLSNEEM
HRWRERCRKQLTEEIIKDHLTLDVYQQKLRQLREDCLRPEQLAILDELIAWGKELAQENN
LPWSTT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcttcctttactttctattggcatgattacgaaacttttggcaccaatcct
cgttgggatcgtccggctcagtttgctggattgagaacagatgaagcactcaatgaaatt
ggtgagccactcgttatctactgtcaacctgcacgtgatcgcttaccgcatccagaagcc
tgtctgctgacagggattacgccacaacttgccgctgctcaaggcctcctggaaccagag
tttgttgcgttgattcatacgcagttagcacaaccagggacttgtggagtggggtataac
tcgttacgttttgatgatgaagtcactcgttttgcgctctatcgcaatttttatgatcct
tatgcgcgcgagtggcaagcaagtaattcacgttgggatgtaattgacctggcgcgtatg
gcatttgctttgcgtcctgaaggaattgcttggccatataatgcagaaggtcatcctagt
tttcgcttggaagatctcacggctgagaacggattggtacatgacagcgcacatgatgcc
ttgtctgatgtgcgtgctactatcgcattggcacgcttgtttaaaaatcagcaaccacgt
ttgtacgactggctatttcgtctgcgtaataaacgtgctgcagcagatttgctggatttg
gcgcagcatacgccagttttgcatacttctcgcatgtatccagccaagtatggctgtact
accttgatcatgccgctgctgtttgaggcaggaaatgctaataacattcttgcctatgat
ttgcgttatgatccatccgaatttatgacactgagtgctgatgcattggccgaacgttta
tttacctctcaggaagagttggctgggcagcagcgtttgccagtcaaggctgttagattg
aataaatgtccggcattagcaccacaaacggtgctgactgaggaaattgcacagcggatt
gaattgaatatagaacggtgcctgcaccattggcaacagttacgagatcatcctgaattc
atgcaacggattgagcatgcttactctgataacagagtgtttgcaaaaaatgatgcggag
ctagcactctatgatggttttgctagtaatcaggatcgtaatttgttttcacgtgtgcag
cattcagatcctaaaaatttggctgaacttggtggggagtttcaagatagccgttatgtt
gaattgctttttcgctatcgagcacgttactatccagaaacattatctaatgaggaaatg
catcgctggcgagaaagatgtcgcaagcaattgacggaagaaatcatcaaagatcactta
actttggatgtatatcagcaaaaattgcgtcaattgcgtgaggattgtttgcgtccagag
caacttgccattctggatgagctaattgcgtgggggaaggaactagcacaggaaaataat
ttaccctggtctactacttaa
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