Nitrosomonas stercoris: Nstercoris_01707
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Entry
Nstercoris_01707 CDS
T06172
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03420
Nucleotide excision repair
nst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nstercoris_01707
03430 Mismatch repair
Nstercoris_01707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_01707
Enzymes [BR:
nst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nstercoris_01707
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nstercoris_01707
MMR (mismatch excision repair)
Other MMR factors
Nstercoris_01707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
ResIII
DAHL
Motif
Other DBs
NCBI-ProteinID:
BBL35441
UniProt:
A0A4Y1YQV1
LinkDB
All DBs
Position
1:1736740..1738947
Genome browser
AA seq
735 aa
AA seq
DB search
MTALLSNLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGHAQPHNILAVTF
TNKAAREMVARISALLPVNVRGMWIGTFHGLCHRMLRAHYQDAGLPQAFQILDMADQLAV
IKRLLKARQLDDKALPPKQLQWFINHAKEEGLRASQMPADDSFNQLLAECYLAYETICIR
EGTVDFAELLLRCYELLSRNEILRDHYRNRFQHILVDEFQDTNRLQYKWIKLLAGIDAQQ
PAAVFAVGDDDQSIYAFRGAYVGNMRALERDFNIAKIIRLEQNYRSQGNILDAANALIAN
NKGRLGKNLWTAAGQGEPVRVYAAITDMDEAGFIVDEVKALHAEGIALSEIALLYRSNAQ
SRVLEHSLFNAAISYRVYGGMRFFDRQEVKHALAYLRLMILPDDDHALLRIINFPPRGIG
TRTLEKLQDQAKMLDTSLWQTALKTHEKSQSTKGIAGFVNLIQTLQQQCEGQPLPEIIRR
VADHSGLIAHYQNKQTESERIENLKELVNAATSFVHEAEDDSLTAFLAHASLEGGEHQAD
NQQDAVQLMTVHAAKGLEFHTVFISGLEEGLFPHDNSRNEPNGLEEERRLMYVAMTRAQQ
RLYLSYAESRMLHGQVRMNVPSRFVDEVPEKLLKNLRITHFSGRSYGQYAAEIGYKADTY
TDQRRKTTTPTISKLAAKNLGEQGLDIGQQVSHAKFGVGTVINCEGNGSDMRVQVKFNQV
GTKWLALAYAKLTPL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgctctacttagtaatctcaatccggagcagcttgaggctgtcacctggccacac
caatctgctttaattttggcgggagcgggcagtggtaaaacccgggtattgacgacacga
attgcctatttgctgcaatcaggacatgctcagccacacaacattctggcggtaactttt
accaataaagcagcgcgcgagatggtggcgcgcattagtgcgctgctgccagtgaatgtt
cgtggcatgtggattggtacttttcatggtttatgccatcgcatgttacgcgcgcattat
caggatgccggtttgccgcaggcttttcagatactggatatggccgatcagctagcagtt
attaaacgtttgctgaaggcacggcaattagatgacaaagcgttgccgcccaaacaatta
caatggtttattaatcatgccaaagaagaagggttgcgtgcttcgcagatgcctgcagat
gacagctttaatcaactgttggcggaatgttatctggcgtatgaaacaatctgcattcga
gaaggaacagtcgattttgctgaattattgttgcgttgctatgaattattaagccgcaat
gaaattttgcgtgaccattatcgcaaccgcttccagcatatattagtagatgaatttcag
gatacgaatcggctgcaatacaaatggatcaaactgctcgcaggaatcgatgctcaacaa
cctgctgctgtttttgcagtgggtgacgatgatcaaagtatttacgcatttcgcggtgcc
tatgttggcaacatgcgtgctctggaacgagatttcaacatagcaaagattattcggctg
gagcagaactaccgttctcagggcaatattttggatgcagccaatgcgttaatagccaat
aacaaaggacgtttgggcaaaaacttgtggacagcagccggacaaggagagccagtcaga
gtgtatgccgcgatcaccgatatggatgaagcgggtttcattgtggatgaagtgaaagcg
ctgcatgctgaagggatagcgctttccgaaatagcattgctgtatcgctctaacgcgcaa
tcacgtgtgctggaacatagtttattcaatgctgcgatttcttatcgcgtttatggtggt
atgcgtttttttgatcgccaggaggtcaagcacgcgttagcttatttacgactaatgatt
ctgcctgatgatgatcatgcactgctgcgcatcatcaattttccgcccagaggcattggt
actcgtacgttggaaaaattacaagatcaagctaaaatgctggataccagcctgtggcag
acagccttaaaaacacatgaaaaaagccaaagtacgaaagggatagctggttttgttaac
ttgatacaaacactgcaacagcagtgtgaagggcagccgctacctgaaatcattcggcgg
gtagcggaccatagtggattaatcgcacattatcaaaataaacaaacagaaagtgaacgc
atagaaaacctcaaggaactggtcaatgcagcaaccagttttgtacatgaggcagaagat
gacagtctcactgctttcctggcgcatgcttcactggaaggcggtgaacatcaagcagat
aaccagcaagatgcggtgcaactcatgacggtgcatgcggccaaaggattagaatttcat
acggtgtttatcagcgggctagaagaaggcttatttccacatgataatagccgtaacgaa
cccaatggattagaagaagagcggcgcttaatgtatgtcgccatgacgcgtgcccagcag
cgtttgtatctcagctatgcggaaagtcgtatgttgcatgggcaggtgcggatgaatgta
ccttcccgatttgtggatgaagttccggaaaaattactcaaaaacttgcgtatcactcat
ttttcaggtcgcagctatggacaatatgctgctgaaatcggatataaagccgacacttat
acagatcaacgaagaaaaaccaccaccccaacgatcagtaaattagctgcgaaaaatctt
ggtgaacaaggtttagatattggccagcaggtatcacatgccaaatttggtgtaggaacg
gtgataaattgtgaaggcaatggctcggatatgcgagttcaggtgaaatttaaccaggtc
ggcacaaaatggcttgcgctagcctacgccaaactgactcctctgtag
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