Nitrosomonas stercoris: Nstercoris_01712
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Entry
Nstercoris_01712 CDS
T06172
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03030
DNA replication
nst03410
Base excision repair
nst03420
Nucleotide excision repair
nst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nstercoris_01712
03410 Base excision repair
Nstercoris_01712
03420 Nucleotide excision repair
Nstercoris_01712
03440 Homologous recombination
Nstercoris_01712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nst03032
]
Nstercoris_01712
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_01712
Enzymes [BR:
nst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nstercoris_01712
DNA replication proteins [BR:
nst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Nstercoris_01712
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Nstercoris_01712
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nstercoris_01712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBL35446
UniProt:
A0A4Y1YMU5
LinkDB
All DBs
Position
1:1742076..1744781
Genome browser
AA seq
901 aa
AA seq
DB search
MKTLVLVDGSSYLYRAFYALPDLRNRFDEPTGAVYGVLNMLRRLYKEYRPDYSVCVFDAK
GKTFREDIYPQYKANRPPMPDDMVSQIAPLYDCIRAMGWPLLVEEGVEADDVIGTLAKRA
RDEQMQCIISTGDKDIAQLVGPGVQLINTMNSESLDEAGVLQKFGVLPTQIVDYLALVGD
SVDNVPGVKKVGPKTAVKWLNQYGSLDNLVAHADEIKGVVGNNLRAALDWLPTSRKLLTI
KCDVPLAADWQDLVALPSDTAKLTELYEQLEFRGWLRELSQTSTEMAAVQQAEVQAPNPD
ERDYQVVLTTPQLEEWVLRCESAELVSIDTETTSLNSMEAELVGISLCIEPGQAAYIPLA
HSYQGVPEQLDRQQVLQRLKPWLEDSDKSKVGQNLKYDRHIFANYEIALNGIEHDTLLQS
YVVESHLPHNLDSLALRHLNIKTVNYDEVTGKGAKRIGFEQVEIRQAGIYAAEDADIPLR
LHHLLFPSIHQNAQLDYIYQQIEMPLLEVLFQIERNGVLLDTDLLQAQSVELTQQLIELE
QQAHAAAGHAFNLNSTKQIQEILFEQQKLPVIKKTPKGAPSTNEAVLQQLALDYPLPKIL
LDYRGLAKLKSTYVDKLPQMLNKQTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRTPEGR
RIREAFIAPDSWHIVSADYSQIELRIMAHISQDAGLIRAFSEGIDVHRATAAEVFGVAAD
QVSAEQRRYAKVINFGLIYGMSEFGLASQLGIERSAARTFIERYFARYPGVAEYMQRTRE
RAKQDGYVETVLGRRLQLPDIHSKQHNRRMGAERAAINAPMQGTAADIIKLAMIAVQQWL
QTEQLNSKLIMQVHDELVLEVAENELSLIQENLPRLMENAFKLDVPLKVEIGFGKNWDQA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactcgtactggttgacggttcttcctatttgtatcgtgcattttatgcactg
cctgatttgcgtaatcgttttgatgagcctacgggtgcagtttatggcgtgctgaatatg
ctacgtcgcttatacaaggaataccggccagattatagcgtgtgtgtgtttgatgcaaaa
ggcaaaacattccgggaggatatttatccgcaatataaagccaatcgtcccccgatgccg
gatgatatggtgagtcagattgcgcctttatatgattgtattcgtgcgatgggctggcca
ctgctggtggaagaaggcgttgaggcagatgatgtgattggtacgctggcgaagcgcgct
cgggatgagcagatgcagtgcattatatcgacgggtgacaaggatattgcgcaactggtt
gggccgggcgtgcagttaatcaacaccatgaatagcgagtcgctggatgaagcgggcgtg
ctacagaaatttggagtactgccaacacaaattgtcgattatttggcattggtaggcgat
agtgtggataacgtgcctggtgtgaagaaggtggggcctaaaacagcggtgaaatggttg
aatcaatatggatcattggataacttagtggcacatgcagacgagattaaaggtgtggta
ggtaacaacttgcgtgctgctttggattggctgccaacttcaagaaaattattaacgatc
aaatgtgatgtgccgcttgctgcagattggcaggatttggttgcgttaccttccgataca
gccaagttgactgagttgtatgagcagcttgaattcagaggctggttgcgtgaactgagc
caaacttctactgaaatggcggctgttcagcaagcagaagtacaagctccaaatccagac
gagcgtgattatcaagttgttttgacaactcctcagcttgaagaatgggtgctgcgatgt
gaatctgctgaattggtgtctattgatactgaaaccaccagcttgaattcaatggaggct
gagctggtaggtatttcactgtgtatcgagccgggccaggctgcctacataccattggca
catagttatcagggagtgccggaacaactggaccgtcaacaagtattgcaacggcttaaa
ccgtggttagaggatagcgacaaatccaaggtagggcagaatctgaaatatgatcgacat
atatttgccaactacgaaattgcgcttaatggtattgagcatgatacgttgttgcaatcg
tatgtagtggaatctcatttgccacataatcttgacagtctggcgctacgtcatttgaat
atcaagacagttaattatgatgaagtaacgggcaaaggtgcgaaacggattgggtttgag
caagtagagattcggcaggcaggcatttatgctgctgaggatgcagatattccactgcgt
ttgcatcatttgctatttccaagcattcaccaaaatgcgcagcttgattatatttaccaa
cagattgagatgccgttgctggaggtactatttcaaatagaacgaaatggtgtgctgttg
gataccgatcttttacaagcacaaagtgttgagttgacacagcaactaattgagctggaa
cagcaggcacatgcagcggcggggcatgcttttaatctgaattccaccaagcagattcag
gaaattttatttgagcagcagaagttacccgtcatcaaaaaaacaccaaagggtgcacct
tccaccaatgaagcggttttgcagcagcttgcactggattatccgttacccaaaattttg
ctggattatcgtggtttggcgaagcttaaatcgacctatgttgataaattaccgcaaatg
ctgaataaacaaactggccgggtgcataccaattatgcacaagctgttgcggttacgggg
cgtttggcgagtaatgatcctaatttgcaaaatattccggtgcgaacgccggaagggcgg
cggattcgtgaagcgtttattgcgcctgatagttggcatattgtgtcggctgattattcg
cagattgagctacgtatcatggcacatatttctcaggatgcaggcttaatccgagctttt
tctgaaggaatagatgtgcatcgtgctactgcggcggaagtatttggtgttgcggctgat
caagtcagcgcggagcaacgtcgttacgccaaggtgattaattttggcttaatttatggc
atgtctgaatttggcttggcttctcaattggggattgaacgcagtgcagcgcgtacattt
atagagcgttattttgcgcgctatccaggtgtggctgagtatatgcaacgcactcgggag
cgggcaaaacaagatggttatgttgaaacagtactggggagaagactgcaattaccggat
attcatagcaaacagcataaccgtagaatgggtgctgagcgagcggcaattaatgcacca
atgcaaggtacagcggcagatattattaaattggccatgattgctgtacagcagtggctg
cagacagagcaattgaacagcaagttgattatgcaggtgcatgatgaattggtattagaa
gttgctgagaatgaactatcgctcatccaggagaatctaccaaggttaatggaaaatgcg
ttcaaattggatgtgccactaaaggttgagattggcttcggaaaaaattgggatcaagca
cattag
DBGET
integrated database retrieval system
