Neomonachus schauinslandi (Hawaiian monk seal): 110569619
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Entry
110569619 CDS
T08474
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110569619 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110569619 (TRIM71)
04121 Ubiquitin system [BR:
nsu04121
]
110569619 (TRIM71)
Enzymes [BR:
nsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110569619 (TRIM71)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110569619 (TRIM71)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110569619 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-C3HC4
zf-RING_5
COG5_N
Motif
Other DBs
NCBI-GeneID:
110569619
NCBI-ProteinID:
XP_021533200
UniProt:
A0A2Y9G4T2
LinkDB
All DBs
Position
1:152913998..152978146
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AA seq
869 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGSAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPPPLPPAPPPPAPSRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICR
ECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKV
VQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLNKLESTISAVQ
QVLEEGRALDVLLARDRMLAQVQELKTVRSFLQPQEDDRVMFTPPDQALYLAIKSFGFVS
SGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAE
VSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSE
GDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGV
ACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDT
RNHRIQLFGPDGIFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQ
SARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFG
QMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtctgcgtcgtcgtcgtcctcgcagacttccacg
tcgtcggggggcggcggcgggggtccgggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggctggcggc
agcgcgccgggagagcccctcaagctgcgctgcccagtgtgcgaccagaaagtagtgctg
gccgaggcggcgggcatggatgcacttccctcgtccgccttcctgctcagcaacctgctc
gacgccgtggtggccacggccgacgagccgccgcccaagaacgggcgtgccggagccccg
gcgggcgcgggcggccacagtaaccaccgacaccacgcgcaccacgcgcacccgcgcgcg
tccgcctcggccccgccgccactcccgccggcgccgccgccgcccgcgccttcccgctct
gcgcccggcggcccggcggcctctccgtccgcgctgctgctgcgccggcctcacggctgc
agctcctgtgacgagggcaacgcggcctcgtcgcgctgcctggactgccaggagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcactaaggaccactacatcgag
cgcggcccgccaggtcccgccgccgcggccgccgcgcagcagctcggcctcgggccgccc
ttccccggcgcgcccttctccatcctgtcggtgttccccgagcgcctcggcttctgccag
caccacgacgatgaggtgctgcacttgtactgtgacacctgctcggtgcccatctgtcgt
gagtgtacgatgggccggcacgggggccatagcttcatctacctccaggaggcgctgcag
gactcgcgggcacttaccatccagctgctggctgacgcgcagcagggccgccaggcaatc
cagctgagcatcgagcaggcccagactgtggcggagcaggtagagatgaaggcaaaggtg
gtacagtcggaggtcaaagctgtgacggcaaggcacaagaaggccctggaggagcgggag
tgcgagctgctgtggaaggtagagaagatccgccaggtgaaagccaagtccctgtacctg
caggtggagaagctgcggcagagcctcaacaagctcgagagcaccatcagtgccgtccag
caggtcctggaggagggccgggcgctggatgtcctgctggcccgggaccgcatgctggcc
caggtgcaggagctgaagaccgtgcgcagcttcctgcagccccaggaagatgaccgcgtc
atgttcacaccacccgaccaggccctgtacctcgccatcaagtcctttggcttcgtcagc
agcggggcctttgcgccgctcaccaaggccacgggcgatggcctcaagagggccctccag
ggtaaggtggcctccttcaccgttattggctacgaccatgatggggagcctcgcctctca
gggggcgacctgatgtcagctgtggtcctgggccccgatggcaacctgtttggtgccgag
gtgagcgaccagcagaatgggacttatgtggtgagctaccggcctcagctggagggtgag
cacctggtgtctgtcaccatgtgcaaccagcacatcgagaacagccccttcaaggtggtg
gtcaagtcgggccgcagctacgtgggcatcgggctcccgggcctgagcttcggcagtgag
ggcgatagcgacggcaagctctgccgcccctggggcgtgagtgtggacaaggagggctac
atcgtcgtggccgaccgcagcaacaaccgcatccaggtgttcaaaccatgtggcgccttc
caccacaaattcggcaccctgggctcccgacccggacagtttgaccggccagctggtgtg
gcctgcgacgcctcccgcaggatcgtggtggccgacaaggacaatcatcgcatccaggtc
ttcacgttcgagggccagttcctgctcaagtttggcgagaagggaaccaaaaacgggcag
ttcaactacccttgggacgtggcggtgaactctgagggcaagatcctggtctctgacacc
cgcaaccaccggatccagctgttcggtcccgacggcatcttcctgaataagtacggcttc
gagggggctctctggaagcactttgactccccccggggcgtggccttcaaccacgagggc
cacttggtggtcaccgacttcaacaaccatcggctcctggtcatccaccccgactgccag
tctgcgcgcttcctgggctccgagggcactggcaacgggcagttcctgcgcccacagggt
gtggccgtggaccaggaggggcgcatcattgtggccgattccaggaaccaccgggtgcag
atgttcgagtccaacggcagcttcctgtgcaagtttggcgcccaaggcagtggctttggg
caaatggaccgcccctctggcatcgctgtcacccccgatgggatgatcgtggtggtggac
tttggcaacaatcggatcctcatcttctaa
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