Neomonachus schauinslandi (Hawaiian monk seal): 110569673
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Entry
110569673 CDS
T08474
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nsu04990
]
110569673 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
nsu04990
]
Other domain-containing proteins
Patched domain-containing proteins
110569673 (PTCHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
110569673
NCBI-ProteinID:
XP_021533252
UniProt:
A0A2Y9G2K2
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Position
X:complement(107323183..107374412)
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AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTRIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAVQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNSKVKMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTITLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEALQEKPAWYRFLLTARFSEDTTDGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWLTLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggctcggccacttc
attgccagtcacccggtcttcttcgcctcggcgcccgtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaggagagcgtggagcacctgctggcgccccagcac
agcctcgccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccgactctactcggacctgcagacccccgggcgctacggtcgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacaccgacctgatcttaaagttgcatgct
gctgtgaccaggatccaggttccaaggcctggttttaattacacgttcgcccacatatgt
atcctgaataatgataagacttgcatcgtggatgacatagtgcatgttctggaggagcta
aagaatgctcgggccaccaaccggaccaattttgctatcacatacccgatcactcactta
aaggatgggagggcagtgtacaatggacaccagcttggaggcgtcactgtgcacagcaag
gaccgggtaaaatccgcagaggccgtccagctcacctactacctgcagtcaatcaacagt
ctcaatgacatggtggctgagaggtgggagtccagcttctgcgacactgtccgactgttc
cagaaatccaatagcaaagtcaaaatgtacccttacacgtcctcctcactgagggaagat
ttccagaagaccagccgtgtatcggaacgttacctggtcaccagcctgatcctggtggta
accatggccatcctgtgctgctcaatgcaggactgcgtccgcagcaaaccctggctgggc
ctgctcgggttggtgaccattaccctggccactctcaccgcggccgggatcatcaatctt
actggtgggaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtt
aaagagagaactgcagcagtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcttcttcaactacctctatgtactctcgttt
tatggttccagcctggtattcactggctacatagaaaacaattaccagcatagtatcttc
tgtagaaaagtcccaaagcccgaggcattgcaggagaagccggcatggtacaggtttctc
ctgacagccagattcagcgaggacacaacggacggcgaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacgcaaaccattgag
tacactactgcccagcaaaagtactttagtaactacagtccggtgattgggttttatata
tacgagtccatagaatactggaacactagtgtccaagaagacgtgctagaatacaccaag
gggttcgtgcggatatcctggtttgagagctatttaaattaccttcggaaactcaatgtg
tctactggcttgcctaagaaaaacttcacagacatgttgaggaattccttcctgaaagct
ccccaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaggtt
gatgtagtggcctccagaatgtttctggtggccaagaccatggaaactaacagagaagaa
ctctatgatctcctggagaccctcaggagactttctgtcacctccaaggtgaagttcatt
gtcttcaacccatccttcgtgtatatggatcgatatgcctcctctttgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcatttctggtggcagat
tctctgattaatgtctggctcactctaacggttgtgtccgtggagtttggagttataggt
ttcatgacattatggaaagtagaactggactgcatctctgtgctatgcttaatttatgga
attaactacacaattgacaattgtgctccactgttatccacattcgttctgggcaaggat
ttcacaagaactaaatgggtaaagaacgctctggaagtgcacggggtagctattttacag
agctacctctgctatatcgttggtctgattcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgaatgtgtggaaatggtggatattgacagtacccga
gtggttgaccaaattacaacagtgtga
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