Neomonachus schauinslandi (Hawaiian monk seal): 110569778
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Entry
110569778 CDS
T08474
Symbol
HTT
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu05016
Huntington disease
nsu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110569778 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
110569778 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110569778 (HTT)
04131 Membrane trafficking [BR:
nsu04131
]
110569778 (HTT)
03029 Mitochondrial biogenesis [BR:
nsu03029
]
110569778 (HTT)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110569778 (HTT)
Membrane trafficking [BR:
nsu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110569778 (HTT)
Mitochondrial biogenesis [BR:
nsu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
110569778 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
110569778
NCBI-ProteinID:
XP_021533384
UniProt:
A0A2Y9G6I2
LinkDB
All DBs
Position
2:complement(201545080..201683856)
Genome browser
AA seq
3130 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQPPPPPQPPQALPQAQPPLPQPQPPQPPPPPPP
PGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLC
SDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAH
LVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAF
IANLKSSSPTIRRTAAGSVVSICQHSRRTQYFYSWLLNVLLGLLVPVEGEHSTLLILGVL
LTLRYLVPLLQQQVEDTSLKGSFGVTRKELEVSPSTEQLIQVYELTLQYTQHRDHNAVTG
ALELLQQLLRTPPPELLQALSTPGGGPLAAHRQPGCRSRSGSIVELLAGGGSSCSPVLSR
KQKGKVLFGEAAALEDDSESRSEGSSPAFTASVKGEIGGELAASSGVSTPGSASSATDSV
GHDIITEQPRSQHTLQPDSVDLTGCDLASAATDGDEEDILSHSSSQISAVPSDPAMDLND
GTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYLGMQIGQPQDEDEEATGILP
DEDVDAFRSSSVALQQAHLLKSMGHSRQPSDSSIDKFVSRDEAAEPGDQENKPCRIKGDI
GQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAVALHPESF
FSKLYKVPLDTMEYPEEQYVSDILNYIDHGDPQVRGATAVLCGTLISSILSRSRFQVGDW
MSTIRALTGNTFSLADCIPLLQKTLRDESSVTCKLACTAARHCVMGLCSSSYSELGLQLI
TDMLTLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLKLQERVLHD
VVIYLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQ
PPSHFSVSTITRIYRGYNLLPSMTDVTVENNLSRVIAAVSRELVTSTARALTFGCCEALC
LLSTTFPVCIWSLGWHCGVPPLSTSDESRKSCTVGMATMILTLLSSAWFPLDLSAHQDAL
VLAGNLLAASAPKSLRSSWTSEEEANPTAAKQEEVWPALGDRTLVPMVEQLFSHLLKVIN
ICAHVLDDVAPGPAMKAALPSLTNPPSLSPIRRKGKEKEPGEPASVPLSPKKGSEASPAS
RQSDAPGPVTANKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQNSAEKFGGFLRSA
LDVLSQILELATLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGTNLASQFDG
LSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQDHDTSGW
FDVLQKVSTQLKTNLTSATKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLD
LLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYH
SKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKELETQKEV
VVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLAKQQMHIDSHEA
LGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRVLISQSTED
IVLSRIQELSFSPYLISCPIIDRLRDGDSTSTPEEHNEGRQIKSLPEETFSRFLLQLVGI
LLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFAADHADG
TFYGLERLNARVRTMLPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLS
PQMPGEEEDPDAACKLGVCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISL
SHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLI
LYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSTAQLPVEELSRIQEYLQSSGLAH
RHQRLYSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLALETVIPDKDWYLRLVKSQCWT
RSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCLGLGMREISGGQRSPLFEAARL
ATLDRVSGLVQQLPATHHVFQPFLPVEPTAYWNKLNDLFGDAVLYRSLTTLARALAQYLL
VFSKLPSHLHLPPEKERDTVKFVVMTLEALAWHLIHEQIPLSLDLQAGLDCCCLALQLPS
LWSVLSSPEMVTHACSLIHCVRFVLEAVVVQPGDQLLSPERRMNTTKASREDEVDSNIQN
PAYITAACGMVAEMVESLPSVLALGHKRNSNTPAFLTSVLRNIIVSLARLPLVNSYTRVP
PLVWKLGWSPKPGGDFGTCFPEIPVEFLQEKEVFKEFIYRINALGWTSRTQFEETWATLL
GVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPR
NKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGTLI
SHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEADVPAPASP
PTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSLLVVSDLFT
ERTQFEMMYLTLTELRRVHPAEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLR
SSHLPSKVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKGVAHCVNIHSQQHVLVM
CATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEEATPSIIYHCVLRGLERLLLCEQLC
RLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPSPGAPDSESVI
VAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFM
ATVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFISASTSPWVSAV
LPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGNPYHRLLTC
LRNVHKVATC
NT seq
9393 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctcgaaaagctgatgaaggccttcgaatccctcaagtcctttcagcagcaa
cagcagcagcagcagcagcagcagcctccgccgccgcctcagcctcctcaggcgctgccg
caggcgcagccgccgctgcctcagccgcagccgccgcagcccccgccgcccccgccgccc
cccggcccggccgtggccgaggagccgctgcaccgaccaaagaaggaactctcagccacc
aagaaagaccgcgtgaaccattgtctgacaatatgtgaaaacatagtggcacagtcactc
agaaattctccagaatttcagaaacttctgggcatcgctatggaactttttctgctgtgc
agtgatgatgcggagtcggatgtccggatggtggctgacgagtgcctcaacagagtcata
aaagccctgatggactccaatcttccgaggctacagttagaactctataaggaaatcaaa
aagaacggtgctccccggagcctgcgcgccgccttgtggaggtttgctgaactggctcac
ctggtccggcctcagaagtgcaggccttacttggtaaaccttttgccttgcctgactcga
ataagcaagagacctgaggaatctgttcaggagaccttggctgcagctgtacccaaaatt
atggcttcttttggcaattttgcaaatgacaatgaaattaaggttctattaaaggctttc
atagcgaatctgaagtcaagctccccgaccattcggcggacggcggctggctcagtggtg
agcatctgccagcactcgagaaggacgcagtatttttatagctggctactaaatgtgctc
ttaggtttgctggtccctgttgagggtgaacattctaccctcctgattcttggagtgctg
ctcacactgagatacctggtgcccttgttgcagcagcaggtcgaggacacgagcctgaaa
ggcagctttggggtgacacggaaagaactggaagtctccccgtcgacagagcagcttatc
caggtctacgagctgaccctgcagtacactcaacaccgagaccacaacgccgtgaccgga
gcgctggagctcctgcagcagctgctcaggacgccgccgcccgagctcctgcaggccctg
agcacgccgggcggcgggccgctcgccgcccaccgccagcccggctgccggagccgcagc
ggcagcatcgtggagctgctagctggagggggttcttcatgcagccctgtcctttcaaga
aaacaaaaagggaaagtgctcttcggagaagcagcggccttggaggatgactccgagtcc
aggtcggagggcagcagccccgccttcacagcctcagtcaagggtgagattggtggtgag
ctggctgcctcttccggggtctccactcctggctctgccagttcagccaccgactccgtg
ggccacgacatcatcactgagcagccccggtcacagcacacgctacagccagactcagtg
gatctgaccggctgtgacctggcgagcgctgccaccgacggggatgaggaggacatcctg
agccacagctccagccagatcagtgccgtcccgtctgacccggccatggacctgaacgat
ggcacccaggcctcctccccagtcagcgacagctcccagaccaccaccgaggggcctgat
tcggctgtgaccccttcagacagttctgaaattgtgttagatggtgccgacagccagtat
ttggggatgcagatcggacagccacaggacgaggatgaggaagccacgggcattcttccg
gatgaagacgtagatgctttcagaagctcttcagttgccctgcagcaagcacatttattg
aaaagtatgggccacagcaggcagccctctgacagcagtatagataaatttgtctccaga
gatgaagctgccgaaccaggagatcaagaaaacaagccttgccggatcaaaggtgacata
ggacagtctaccgatgacgattctgttcctcttgtccattgtgtccgccttctgtctgct
tcatttttgctgactggggaaaaaaatgtgctggttccggacagggacgtgagggtcagt
gtgaaggcgctggcactcagctgtgtgggggccgctgtggcccttcatcctgagtctttc
ttcagcaaactttataaagtacctcttgacaccatggagtaccctgaggagcagtatgtg
tcagacatcctgaactacatcgatcacggagacccccaggtcagaggagccacggccgtt
ctctgtgggaccctcatctcctccatcctcagcaggtcccgcttccaagtgggagactgg
atgagcaccatcagggccctgacaggaaatacattttctctggcggactgcattcctttg
ctgcagaaaactttgagggatgaatcttctgtgacttgcaagttggcttgtacagctgcg
aggcactgtgtcatgggtctctgcagcagtagctatagcgaattgggattacagctgatc
accgacatgctgaccttgagggatagttcctactggctggtgaggacagagcttttggaa
actcttgcagagattgactttaggttggtgagctttttggaggcaaaagcagaaaacctg
cacagaggggcccatcattacacagggcttttaaaactgcaagaacgagtgctgcatgat
gtcgtcatctatctgctgggggacgaggaccccagggtgcggcacgttgccgcagcagct
ttgatgaggcttgtcccaaagctgttctacaagtgcgaccaaggacaagctgaccctgtc
gtggctgtggcgagagatcaaagcagtgtttacctgaagctccttatgcacgagacgcag
cctccatctcacttctccgtcagcaccatcaccagaatatacagaggctataacttactg
ccgagcatgacggacgtcactgtggaaaacaacctctccagagtcatcgcggcagtttcc
cgtgaactggtcacgtccaccgcgcgcgcgctcacatttggatgctgcgaagctctgtgt
ctcctttcaaccacctttcccgtctgcatttggagtttaggttggcattgtggggtgccc
ccattgagcacctctgatgagtcgagaaagagctgcactgttggcatggccacaatgatc
ctcaccttgctctcatcagcttggttcccgctggatctctcagcccatcaggatgctttg
gttttagccggaaacttgcttgcagccagtgctcccaaatctctgagaagttcctggacc
tctgaagaagaggccaacccaacagctgccaagcaggaagaggtctggccagctctgggt
gaccggaccctggtgcccatggtggaacagctcttctcccacctgctgaaggtgattaat
atctgtgctcacgtcttggacgatgtggctccgggaccagcaatgaaggcagccttgcca
tctctgacaaaccctccttctctaagtcccatccgacgaaagggaaaggagaaagaaccc
ggagagccggcctctgtgcccttgagccccaagaaaggcagtgaagccagtccagcctct
cgacaatctgatgccccagggcctgttacagcaaataagtcctcgtcgctggggagtttc
tgtcaccttccttcgtacctcaaattgcatgacgtcctgaaagctactcacgccaactac
aaggttaccttggatcttcagaacagcgctgaaaagtttgggggctttctgcgctctgcc
ttggatgtcctctctcagatcctagagctggcgacgctgcaggacatcgggaagtgtgtt
gaggagatcctagggtatctgaaatcctgtttcagtcgggaaccagtgatggcaactgtt
tgcgttcagcagctgttgaagactctctttgggacaaacttggcctcccagtttgatggc
ttgtcctccaaccccagcaagtctcaaggccgagcacagcgtctgggctcctccagtgtg
aggccaggcttgtaccactactgcttcatggctccgtacacccacttcacccaggcctta
gccgacgccagcctgaggaacatggtgcaggcggagcaggaccacgacacttcagggtgg
tttgacgtgcttcagaaggtgtctacccagttgaagaccaacctcacgagcgccacaaag
aaccgcgcggataagaatgctattcataatcacattcgcttgttcgagcctctggttatt
aaagctttgaaacagtacacaaccaccacgtccgtgcaactgcagaggcaggtcctggac
ttgctggcccagctggtgcagttacgggtcaattactgtcttctggactcggaccaggtg
tttattggatttgtgctgaagcagtttgaatacattgaagtaggccagttcagggaatca
gaggcaattattccaaacatctttttcttcctggtattactatcttacgaacgctatcat
tcaaaacagatcattggaattcctaaaatcattcagctctgtgatggcatcatggccagt
gggaggaaggctgtgacacatgccataccagctctgcagccgatagtccacgacctcttt
gtcctgagaggagccaataaagccgacgcaggaaaagagcttgaaacccagaaagaggtg
gtggtgtcgatgctgctgagactcatccagtaccatcaggtgttggagatgttcatcctg
gtcctgcagcagtgccacaaggagaacgaagacaagtggaagcgactgtctcggcagata
gccgacgtcatcctcccgatgttagccaagcagcagatgcacattgattctcatgaagcc
cttggagtgttaaatactttatttgagattctggccccttcctccctccgtcccgtggac
atgcttttacggagtatgtttgtcactccagatacaatggcatctgtgagcactgttcaa
ctgtggatctcaggaatcctggccattttgagggttctcatttcccagtcaactgaagat
attgttctttctcgtattcaggagctctccttctccccatatttaatctcctgtccaata
attgataggttaagagatggggacagtacttcaacaccggaagaacacaacgaagggaga
caaatcaagagtttgccagaggaaacattttcaaggtttctactacaactagttggcatt
cttttggaggatattgttacaaaacagctaaaagtggaaatgagtgaacagcaacatact
ttctattgtcaagaactaggcactctgctaatgtgtctgatccacatcttcaagtctgga
atgttccggagaatcacggcggctgcctcgagactcttcgcggcggaccacgccgacggc
actttctacggcctggagaggctgaatgcgcgcgtgcgcaccatgctgcccacgcaccca
gcgctcgtgctgctctggtgccagatcctgctgctcgtcagccacaccgactaccgctgg
tgggcagaggtgcagcagacccccaggagacgcagtctgtccagtacgaagtcactcagc
ccccagatgcctggagaggaggaggaccccgatgcagcctgcaagcttggggtgtgcaat
agagaaatagtgcgaaggggagcgctcattctcttctgcgattatgtctgtcagaaccta
cacgattcagagcacctaacatggctcattgtgaatcacatccaggacctgatcagtcta
tcccacgagccccccgtgcaggattttatcagtgctgttcatcggaactccgctgccagt
ggcctcttcatccaggcaattcagtctcgttgtgaaaacctttcaacccctaccaccctg
aagaagacgcttcagtgcttagaagggatccacctcagccagtcgggcgctgtgttaata
ctgtatgtggacaagcttttgtgcactccgttccgtgtgctggctcgcatggtcgacact
ctggcctgtcgccgggtggaaatgcttctggctgcaaatttacagagcagcacggcccag
ctgccagtggaggagctcagcaggatccaggaataccttcagagcagcggcctggctcac
agacaccagaggctctactccctgctggacaggcttcgtctcgccactgcacccggctca
cgtggcccttctcctccggtcacgtcccacccgctggacggggatgggcccctggcactg
gagaccgtgattccagacaaagactggtacctacgtctagtcaaatcccagtgctggact
aggtcagattctgcgctgctggaaggggcagaactggtgaatcggattcctcccagtgac
atgagtacattcatgatgaactcggaattcaacttaagcctgttggccccatgcctgggc
ctgggcatgcgcgaaatctccggaggccagaggagtcccctttttgaagcagctcgcctg
gccactctggaccgtgtgagcggcctggttcagcagctgcctgctacccaccacgttttc
cagccgttcttgcctgtggagcccaccgcctactggaacaagttgaatgatctgtttggg
gatgctgtgttgtatcggtccttgaccactctggcccgggccctggcccagtacctgctg
gtgttctccaagctgcccagccatttgcacctccctcctgagaaggagagggacactgtg
aaatttgtggtcatgaccctcgaggccctggcgtggcatttgatccatgagcaaatccca
ctgagtctggacctacaggccggcctggactgctgttgcctggccctgcagctgcccagc
ctctggagcgtgctgtcctccccagagatggtcacccatgcctgctctctcattcactgt
gtccgcttcgtcctggaagccgttgtggtgcagcctggggatcagcttcttagtccagaa
agaaggatgaacaccacaaaggcttccagagaggatgaagtagattcaaacatacaaaac
ccggcatatatcaccgcagcctgtgggatggtggcagaaatggtggagtctttgccgtcg
gtgttggccttggggcataaaaggaatagcaacaccccagcgtttctcacgtcggtgctc
aggaacatcatcgtcagcctggctcgcttacccctcgtcaacagctacacgcgcgtcccc
ccactggtttggaagctcggatggtcgcccaagccgggaggtgactttggcacatgcttc
cctgagatcccggtggagttcctccaggagaaggaagtctttaaagagttcatctaccgc
atcaatgcactagggtggaccagccgcacccagtttgaggaaacgtgggccaccctcctt
ggcgtcctggtgactcagcccctcgtgatggagcaggaggagagcccgccggaagaagac
acggagaggacccagatcaatgtcctggccgtgcaggccatcacctccctggtgctgagc
gcaatgaccgtgcccgtggctggcaacccagctgtgagctgcttggagcagcagccccgg
aacaagcccctcaaagccctcgacaccaggtttgggaggaagctgagcattatccgagga
attgtagagcaggaaatccaagcgatggtttcaaagagagagaacattgccacgcatcac
ttataccaggcgtgggaccccgtcccttctctgtctccagctacgacaggtaccctcatc
agccacgacaagcttctgctgcagatcaaccccgagcgggagctggggaacatgagctat
aagcttggccaggtgtccattcactccgtgtggctggggaacagcatcacacccctgaga
gaggaggagtgggaggaagaggaagaggaggaggccgatgttcccgcccctgcgtcacca
cccacatcacccgtcaactccaggaagcaccgggctggggtcgatatccactcctgttcc
cagtttttgctcgaactgtacagtcgctggatcctgccgtcagggtcagcccgaaggacg
cccatcatcctgatcagtgaagtggttcgatctctcctagtggtctcagacttgttcacc
gaacgcacccagtttgagatgatgtatctgacgctgacagagctgcggagggtgcaccct
gcagaagacgagattctcattcagtacctggtacccgccacctgcaaggcggctgccgtc
ctgggaatggataaggctgtggcagagcccgtcagccggctgctggagagtaccctgagg
agcagccacctgcccagcaaggtcggggccctgcacggcgctctctacgtgctggagtgt
gacctcctggatgagacggccaagcagctcgtcccagtcatcagcgactacctcctgtcc
aacctcaaaggggtggcccactgcgtgaacattcatagccagcagcatgtgctggtgatg
tgtgccaccgccttctacctgatcgagaactatcccctggatgtgggcccggagttctct
gcgtcaatcatacagatgtgtggggtgatgctgtccggaagtgaggaagccaccccgtcc
atcatctaccactgcgtcctgcggggcctggagcgcctcctgctgtgcgaacagctgtgc
cgcctggatgcggagtccctggtcaagctgagtgtggacagagtgaatgtgcacagcccg
caccgggccatggccgccctgggcctgatgctcacctgcatgtacacagggaaggagaaa
atcagtccgggcagaacctcagaccctagccccggcgccccggacagtgagtcagtgatt
gtggctatggaacgcgtgtctgttctttttgacagggtcaggaaagggttcccctgtgaa
gccagagtggtggcacggatccttcctcagtttttagacgacttcttcccaccccaggat
gtcatgaacaaagtcattggagaatttctctccaaccagcagccataccctcagttcatg
gccaccgttgtgtacaaggttttccagacgctgcacaccaccgggcagtcatccatggtc
cgggactgggtcatgctgtccctctccaacttcacccagaggaccccggtggcaatggcc
gtgtggagcctctcctgcttcttcatcagcgcttccaccagcccgtgggtctcggctgtc
cttccccacgtcatcagcaggatgggcaagctggagcaggtggacgtgaacctcttctgc
ctggtggccacggacttttacagacaccagatagaagaggagctggaccgccgggccttc
cagtccgtgttcgaggtggtcgcggcaccaggaaacccatatcatcgattgctgacttgt
ttgcggaacgtccacaaggtcgccacgtgctga
DBGET
integrated database retrieval system
