Neomonachus schauinslandi (Hawaiian monk seal): 110570479
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Entry
110570479 CDS
T08474
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04136
Autophagy - other
nsu04140
Autophagy - animal
nsu05010
Alzheimer disease
nsu05014
Amyotrophic lateral sclerosis
nsu05016
Huntington disease
nsu05017
Spinocerebellar ataxia
nsu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110570479 (WIPI1)
04136 Autophagy - other
110570479 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110570479 (WIPI1)
05014 Amyotrophic lateral sclerosis
110570479 (WIPI1)
05016 Huntington disease
110570479 (WIPI1)
05017 Spinocerebellar ataxia
110570479 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
110570479 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110570479 (WIPI1)
03029 Mitochondrial biogenesis [BR:
nsu03029
]
110570479 (WIPI1)
Membrane trafficking [BR:
nsu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110570479 (WIPI1)
Mitochondrial biogenesis [BR:
nsu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110570479 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_HPS5
EIF3I
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
DUF5711
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
110570479
NCBI-ProteinID:
XP_021534200
UniProt:
A0A2Y9G7S3
LinkDB
All DBs
Position
15:complement(48388800..48422322)
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAADGPPGGVEAALSCLSFNQDCTSLAIGTKVGYKLFSLSSVEQLDQVHGSTEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEEA
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTNSRPEEPSTWTGYMGKMFMAASNYLPTQVSDMMNQ
DRAFATGRLNFSGQRNICALSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTTEENKENDLRPSLPQSYAATVARPSTSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggcggcggatggccccccgggcggggtcgaggcggcgctcagctgctta
tctttcaaccaggactgcacatccctagcaattggaaccaaagtcggttataagctgttt
tctttgagttctgtggagcaactggaccaagtccatggaagcaccgagatcccggatgtc
tacatcgtggagcgccttttctccagcagcctggtagtggtggtcagtcacacgaagcca
cggcagatgaacgtctatcactttaagaaaggcacggagatctgtaattacagctattcc
agcaacatcttgtccataaggctgaaccggcagaggctgctggtgtgcctggaggaggcc
atttacattcacaacatcaaagacatgaagctgctgaagaccatcctggatattcctgca
aacccaacaggtctgtgtgccctctcaatcaaccattccaattcgtacgtggcctatcct
ggaagcctgactacaggcgagatcgtgctttacgatggacactccctgaaaacagtctgc
acgattgctgcccacgaggggacgctggccgccatcaccttcaatgcctcgggctccaaa
ctagcgagcgcctctgaaaaaggcaccgtcatccgggtgttctctgtacctgacgggcaa
aagctctacgagtttcggagaggcatgaaaaggtacgtgacgatcagctcgctcgtgttc
agcatggactcgcagttcctctgtgcctccagcaacaccgagaccgtgcacatcttcaag
ctggagcacctcactaacagccgaccagaagagccttcgacctggactggctacatggga
aaaatgttcatggctgcttccaactacctccccacccaggtgtcagacatgatgaaccag
gacagggccttcgccaccggacgtttgaatttctctgggcagaggaacatctgcgccctc
tccacgatccagaaactgccgaggctgctggtcgcatcgtccgatggacacctttacatc
tacaatttggaccctcaggacggaggagaatgtgtcttaatcaagacccacagcttgctc
agctcaggaacaacagaagaaaataaagaaaatgacctcagaccttcattacctcagtct
tacgcagcaactgtagccagaccgagcacctcggccgcctccacggtgccaggttattct
gaggacggcggagccctccgaggagaggttattcctgaacatgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgaattcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcatga
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