KEGG   Neomonachus schauinslandi (Hawaiian monk seal): 110570571
Entry
110570571         CDS       T08474                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4-like
  KO
K10752  histone-binding protein RBBP4
Organism
nsu  Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03082  ATP-dependent chromatin remodeling
nsu03083  Polycomb repressive complex
nsu04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:nsu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110570571
   03083 Polycomb repressive complex
    110570571
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    110570571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsu03036]
    110570571
Chromosome and associated proteins [BR:nsu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     110570571
  Histone modification proteins
   HAT complexes
    HATB complex
     110570571
   HDAC complexes
    Sin3A-HDAC complex
     110570571
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     110570571
    PRC2.2
     110570571
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     110570571
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110570571
  Chromatin remodeling factors
   NuRD complex
    110570571
   NuRF complex
    110570571
   NuRF complex (fruit fly)
    110570571
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 CAF1C_H4-bd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_DCAF12 Beta-prop_RIG_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 NBCH_WD40 Beta-prop_IFT122_1st MIOS_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 110570571
NCBI-ProteinID: XP_044771308
UniProt: A0A8M1MFF7
LinkDB
Position
5:49396700..49397973
AA seq 424 aa
MANKEAAFDDAVEXHVINEEYKIWKKNTPFLFDLVMTHALEWPSLTAQWLADVTRLEGKD
FSIHRLVLGTHTSVEQNRPVIASVRLPNNDAEFDASHYDGEKGEFGGFGSVGGKIEIEIK
INHEGEVNRVRYMPQIPCIIATKTPSSDVLFDSTKHPSKPDPSGECNPDLRLRGHQKEGY
GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDVKTIFTGHTVVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKPTHSVDAHTAEVNCLSFHRYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWLPHSETILASSGTDRRLNVWELSKIGEEQSPEDAEY
GPPELLFICGGHTAKISDFSWYPNEPWVICSVSEDNIMQVGQMAENIYNDEDPEGSVDPE
GQES
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggccaacaaggaagcagcctttgatgatgcagtagaancacatgtgatcaacgaagag
tacaaaatatggaaaaagaacaccccttttcttttcgatttggtgatgacccatgctctg
gagtggcctagcctaactgcacagtggcttgcagatgtaaccagactggaagggaaagac
ttcagcattcatcgacttgtcctgggaacacacacgtcagttgagcaaaaccgtcctgtg
atagccagtgtgcggctccctaataatgatgctgagtttgatgcttcacactacgacggt
gagaaaggagaatttggaggttttggctcagttggtggaaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaaccgggtgcgttatatgccccagatcccttgcatcatt
gcaacaaagactccatccagtgatgttctttttgactctacaaaacatccttccaaacca
gacccttctggagagtgcaacccagacttgcgtctgcgtggacatcagaaggaaggctat
ggactttcttggaacccaaatctcagtgggcacttacttagtgcttcagacgaccatacc
atctgcctctgggacatcagcgctgttccaaaggaaggaaaagtggtggatgtgaagacc
atctttacaggacatacagtggtagtagaagatgtttcctggcatttgctccatgagtct
ctgtttgggtcagttgctgatgatcagaaacttatgatctgggatactcgttcaaacaat
acttccaaaccaacccactcagttgatgctcacactgctgaagtgaactgcctatctttc
catcgttacagtgagttcattctggccacaggatcagccgacaagactgttgccttgtgg
gatctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgaaatattc
caggttcagtggttgccccacagtgagactattttggcttccagtggtactgatcgcaga
ctgaatgtctgggaactaagtaaaattggagaggaacaatccccagaagatgcagaatat
gggccaccagaattgttgtttatttgtggtggtcacactgccaagatatctgatttctcc
tggtatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaagtg
gggcaaatggcagagaacatttataatgatgaagatcctgaaggaagcgtggatccagaa
ggacaagagtcctag

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