Neomonachus schauinslandi (Hawaiian monk seal): 110570650
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Entry
110570650 CDS
T08474
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110570650 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsu03032
]
110570650 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110570650 (TOPBP1)
DNA replication proteins [BR:
nsu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110570650 (TOPBP1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110570650 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
110570650
NCBI-ProteinID:
XP_044776369
UniProt:
A0A8M1MYH0
LinkDB
All DBs
Position
1:125196229..125273416
Genome browser
AA seq
1513 aa
AA seq
DB search
MSRNDKEPFLVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCLHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDVNMEDFKCPIFLGCIICVTGLCSLDRKAVQQLTIKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVDKGFCQDESIYKTEPRPETKTVPDTSTPT
GQINTVDSRTLSDVSHISNISASCINESMCNSVLNSKVEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKGYMLPEEPYIHANYQPVEIPVSDQPESKTALLKKNNSFSKKDLASD
EKHEQADEDLLSQYVNNNPTVVEAVKSEVEPFNDSTHISLQEENQSSVTHCLPDASTITE
EGLFSQKSFLVLGFSNENESNIANIIRENAGKIVSLQSRIVADYAVVPLLGCEVEATVGE
VVTNTWLVTCIDYQTLIDPKSNPLFMPVPVMAGMTPLEDCVISFSQCAGAEKDSLTFLAN
RLGASVQEFFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTISWLLETARMGK
RANESHFLIEKSTKEEQSLETEITNRVNLNPDTPEHPVAHLETHRKTAVTPLDMNRFQSK
AFHAVISQHTRQVSVSPPVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPQLKGAQLEKEEAPKPLHKVV
VCVSKKLSKKQGELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGVHIV
SEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLSNSRLLSADSTTKDDEPNHL
PIEENDIDSITTSNKESAKSNGDGRNDSKGVLTQTLEMRENFQKQLQEIMSATSIVKPQG
QRASLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQIVPDVNTEPSQNEQIIWDDPT
AREERARLASNLQWPSCPTQYSELQVDIKKLEDSPSQEPLHDSEIAKQAVCDPENMCVTE
APKHPISEELETPVKDGHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETHEDLKKQYI
FQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYLASVAAGKWVL
HRSYLEACRTAGHFVLEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKLQQRQESGI
VEGAFSGWKVILYVDQSREAGFKRLLQSGGAKVLPGHSIPLFKEATHLFSDFNKLKPDDS
GVNIAEAAAQNVYCLKTEYIADYLMQESPPRVENYCLPEAISFLPNNKEPGPGLSQKRKA
PTEKNKIKRPRVN
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccatttcttgtgaagtttttaaagtcttcagacaactcc
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaagcattgaagataaaggaaaatgataggtcactttatatctgt
gacccatttagtggcgttgtctttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtttgcaccaccagcgatgcgtcccaagagctgaacatcca
gtttataatatggttatgtctgatgtaactgtatcttgtacaagcctggaaaaagataaa
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatatagagaccttaat
atatcagtaactcaccttattgcaggagaagttggcagcaaaaaatatttagttgctgca
aacctaaagaaacctattttgcttccttcttggattaaaacactttgggaaaagtcacaa
gagaaaaaaatagctaggtatactgatgtaaacatggaagacttcaagtgtcctattttt
cttggttgcattatctgtgtgactggcttgtgtagcttagacaggaaggcagtccagcaa
ctcacaattaagcatggaggtcaatacatgggacaactgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatacgaatgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtgttgacaaaggtttttgtcaggatgaatcc
atatacaagacagagcctagaccagaaacaaagactgtgcctgatacttcaactcctact
ggccagatcaacacagttgacagtcgtactctttcagatgtcagccatatttccaacatc
agtgcaagttgcataaatgaatcgatgtgtaattcagttcttaatagtaaagtggagcct
acacttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttatta
gatggttgtcggatctatctttgcggttttagtggcagaaagctagataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttgggataaatcggcccacaggcct
catgtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaa
gagccatatatccatgctaactaccagccagtggaaattccagtttcagatcaacctgaa
agtaaaacagctcttttaaaaaagaacaacagcttctctaagaaagacttggcttctgat
gaaaagcatgaacaagctgacgaagatctgctctctcagtatgtaaataataacccaaca
gtagttgaagctgtgaagtctgaagttgagcccttcaatgactctactcatatttctctg
caagaagaaaatcagtcttctgtcactcattgcctccctgacgcttctacaattactgaa
gaaggtttatttagccaaaagagtttccttgttttggggtttagtaatgaaaatgaatct
aatattgcaaatatcataagagaaaatgctggaaaaatcgtgtcccttcagagcagaatt
gttgctgattatgctgtggttccgctactggggtgtgaagtagaagcaactgtgggagaa
gttgtcacaaatacgtggctggtaacttgtatagactatcagactttaattgatccaaag
tcaaatcctctcttcatgccagtcccagtaatggcaggaatgactcctttagaggattgt
gttatttcgttcagccagtgtgcaggagcagaaaaagattcattgacattcttagcaaat
cgccttggagcaagtgttcaggaattctttgttcgcaaatccaatgcaaagaaaggcatg
tttgccagtacgcatcttgtactgaaagaaccaggtggatctaaatatgaagctgccaag
aagtggaatttaccagcagtcaccatatcttggttgttggagactgctagaatgggaaag
agagcaaatgaaagccattttctgattgaaaagtcaactaaagaagaacaaagtttggaa
actgaaataacaaacagggtgaatctaaatccagatactccggagcatcctgttgcacac
ctggaaactcacaggaaaacagctgttacacctttagatatgaaccgctttcagagtaaa
gctttccatgctgtgatctcacaacacaccagacaggtttcagtctccccaccagtggga
cagccacttcagaaggagccctccttacatctggatacaccatcaaaatttctgtccaag
gacaaactcttcaagccttcctttgatgtgaaggatgcacttgcagccttggaaactcca
ggaggtcctagccagcagaaaaggaaactgagtacgccactttcagaagtcattgtcaga
aacttgaaacttgctttggcaaatagttcccgaaatgctgttgctctgtctgccagccct
cagctgaagggtgcccaattggagaaggaagaagcccccaagccacttcacaaggtagtg
gtatgtgtgagtaagaaactcagtaagaagcagggtgaactgaatgggattgcagcctct
ctaggagcagattacagatggagttttgatgaaacggtgactcatttcatttatcaaggc
cgaccaaatgacactaaccgagagtataaatctgtaaaagaaagaggagtacacattgtt
tcagaacactggcttttagaatgtgcgcaagagtataaacatcttcctgaatctctttat
ccacatacttacaatcccaaaatgagcttggatatcagtacagtgcaagatggcagactc
tctaatagtcgactactctcagcggattcaacaacaaaggatgatgagccaaatcatttg
cctatagaagaaaacgatatagacagtataaccaccagtaacaaagaatcagcaaaatca
aatggagatggaaggaatgactctaaaggagttctgacacagaccttggagatgagagaa
aactttcaaaagcagctgcaggaaataatgtctgcaacatcaatagtgaaaccccaagga
cagagggcttccctttcaagaagtggttgtaacagtgcttcttcaacccctgatagcact
cgctctgcccgcagtgggcgaagtagagtcctggaggcactgaggcagtcgcgtcaaata
gtacctgatgtcaacacagagccctcccagaatgaacagatcatttgggatgacccgaca
gccagggaggagagagcaaggcttgccagcaatctgcagtggcctagttgtcccacacag
tattctgagcttcaggttgacattaaaaaattggaggattctccttcccaggagccttta
catgattcagaaattgctaaacaggctgtctgtgatcctgaaaacatgtgtgtgactgaa
gccccaaaacacccgatctctgaagaactggaaacaccggtaaaagacggccacctgatc
cctacacctcaagcccccagtattgccttccccctagccaacccaccagtggctccacac
cctagagaaaagattataacaatagaggaaacacatgaagacttaaaaaaacagtatata
tttcagttgtcatctctgaatcctcaagaacgtattgattattgtcatctgattgaaaaa
ctaggtggattagtaatagagaaacagtgctttgatcccaattgtacacacattgttgtg
ggacatccacttcgaaacgagaagtatttagcctcagtggcagctgggaaatgggtgctt
catcgctcctacctggaagcatgccggactgctggacacttcgtgctggaagaagactat
gaatggggaagtagttccatactcgatgttttgactggaatcaatgttcagcaacgaaga
ctagcacttgcagcaatgagatggaggaaaaaactccagcaaagacaagaatcaggcatc
gttgagggggcatttagtgggtggaaagttatcttatatgttgaccaatcccgagaagca
ggattcaaacgccttcttcagtcaggaggagcaaaggtactacctggtcattctatacct
ttgtttaaagaagccacacatctcttctctgacttcaataaactgaaaccagatgactca
ggagttaatatagcagaagctgccgcccaaaatgtgtattgcttgaaaacagagtacatt
gctgattatctgatgcaggaatcccctcctcgagtagaaaattactgtctaccagaagcg
atttcatttcttccgaataataaggaacctgggcctggattatcacagaagaggaaagct
cctacagagaaaaataaaatcaaacgacctagagtaaactaa
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