Neomonachus schauinslandi (Hawaiian monk seal): 110570945
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Entry
110570945 CDS
T08474
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X2
KO
K17890
autophagy-related protein 16-1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04136
Autophagy - other
nsu04140
Autophagy - animal
nsu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110570945 (ATG16L1)
04136 Autophagy - other
110570945 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110570945 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110570945 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
nsu03029
]
110570945 (ATG16L1)
Membrane trafficking [BR:
nsu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
110570945 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
110570945 (ATG16L1)
Mitochondrial biogenesis [BR:
nsu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110570945 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_DCAF12
CCDC93_CC
Beta-prop_NWD2_C
ZapB
KASH_CCD
Beta-prop_WDR75_2nd
TolB_like
Vma22_CCDC115
V_ATPase_I
Phage_GPO
Fez1
Motif
Other DBs
NCBI-GeneID:
110570945
NCBI-ProteinID:
XP_021534705
UniProt:
A0A2Y9G966
LinkDB
All DBs
Position
3:186219748..186257499
Genome browser
AA seq
607 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRATSKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDP
HPGSSKEVRVPTAATCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
IVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRV
VFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSK
AVLWSEY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgacttcccccgttggaagcgccacatttcggaggag
ctgaggcggcgggaccggctgcagcggcaggcattcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcccggacacgatggtgcctggaatgatagt
cagctacaagagatggcccagctgaggattaaacaccaagaagaactgaccgaactacac
aagaagcgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagactatctctgac
ctggagacggagtgccaagaactacgcagtaagcttcaggacctcgaaagagccaaccag
actctgaaggacgaatatgatgccctgcagatcacgtttactgccttggaggagaaactg
aggaaaactactgaagagaaccaggagctggtcaccaggtggatggccgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaagcccggctg
cagaaggagcttgcagaagcagcaaaggaacctctgcccgttgaacaggatgatgacatt
gaagtcattgtggacgaaacctctgatcacacggaggagacgtctcccgtgcgggccatc
agcagagcgaccagtaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggaggcgctctgtctcttcgtttccagttccccaggataatgtggatcct
catcctggttctagcaaagaagtgagagtgccaacagcagcgacgtgtgtcttcgatgct
cacgatggggaagtcaacgctgtgcagttcagtccaggctcccggctgctggccacagga
ggcatggatcggagagttaagctttgggaagtgtttggagataaatgtgagttcaagggc
tccctgtctggcagtaatgcgggaattacgagcatcgaatttgacagcgctggatcttac
ctcctagcagcttcaaatgattttgcaagtcgaatctggactgtggatgattatcggtta
cggcacacactcacgggacacagcggcaaagtgctgtctgccaagttcctgctggacaat
gcgcgtattgtttccggaagtcatgaccggaccctcaagctctgggatctacgcagcaaa
gtctgcataaagaccgtgtttgcaggatccagctgcaacgatatcgtttgcacggagcag
tgtgtcatgagtggacatttcgataagaagattcgcttctgggatatccgatcggagagc
atcgtcagggagatggagctgctggggaagattactgccctggacttaaacccggagaga
acagaactcctcagctgctctcgcgatgacctgctaaagatcatcgatctgcgaatcaat
gccgtcagacagacgtttagcgcgcctgggttcaagtgcggctctgattggaccagagtt
gtgttcagccctgatggtggttatgtggcagcgggctcggctgagggctctctctacatc
tggagcgtactttcggggaaggtggagaaggtcctttccaagcagcatggctcgtccatc
aatgcagtggcatggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaa
gctgtgctatggtcagagtattga
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