Neomonachus schauinslandi (Hawaiian monk seal): 110571184
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Entry
110571184 CDS
T08474
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X2
KO
K06753
roundabout, axon guidance receptor 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04360
Axon guidance
nsu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110571184 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110571184 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110571184 (ROBO1)
Cell adhesion molecules [BR:
nsu04515
]
Immunoglobulin superfamily
ROBO family
110571184 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
110571184
NCBI-ProteinID:
XP_021534974
UniProt:
A0A2Y9GB17
LinkDB
All DBs
Position
1:complement(30933018..31900835)
Genome browser
AA seq
1615 aa
AA seq
DB search
MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSTSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPI
IRQGPGNQTVAVDGTVVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPAKNSVVIPDLRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGASCWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
AGNGNSDGNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPAQQKQEVAPIQYNI
MEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPK
QGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEETGHMQHQPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDASGRRHFHASQCPRPTSPVSTDSNMSAAQIQKARPAKKQKHQPGHLRREAY
TDDLPPPPVPPPAIKSPTVQSKAQLEVRPVIVPKLPSIEARTDRSSDRKVGSYKGREVLD
GRQVADMRTNLGDTREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSN
NPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcctgctcacttttacctctttggattaatatgtctctgttcaggctcc
cgtcttcgtcaggaagattttccacctcgcattgttgaacacccttccgacctaattgtg
tcaaaaggagaacctgccactttgaactgtaaagccgaaggccgccccacacccactatc
gaatggtacaaagggggggagagagtggagacagacaaagatgaccctcgctcacaccga
atgttgctgccaagtggatctttatttttcttacgtatagtacatggacgaaaaagtagg
cctgatgaaggggtctacgtctgtgtagcaaggaattacctcggagaggccgtgagccat
aacgcatcgctggaggtagcgatcctacgggatgacttcagacaaaatccttctgatgtc
atggtggccgtgggggagcctgctgtgatggaatgccaacctccacgaggccatcccgaa
cccaccatttcctggaagaaagatggctctccactggatgacaaagatgaaagaataact
atacgaggcggaaagctcatgattacttacacccgcaaaagtgatgctggcaaatatgtt
tgtgttggtaccaacatggttggggaacgtgagagtgaagtagcggagctaactgttttg
gagagaccatcgtttgtgaagagacctagtaacttggctgtgactgtggacgacagtgcc
gaattcaaatgtgaggcccgaggcgaccctgtgcctacggtacgatggagaaaagacgat
ggggaactgcccaaatccagatatgaaatcagagatgatcataccctgaagattcggaaa
gtgatggctggtgacatggggtcatacacttgtgtggcagaaaatatggttggaaaggct
gaagcatcagctactctgactgtccaagttgggtctgaacctccacactttgttgtgaaa
ccccgtgaccaggttgttgccttgggacgaactgtaacgttccagtgtgaagcaaccgga
aatcctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatat
cagccacctcagtcaaccagccgcttttcggtctcccagactggtgatctcactatcact
aacgtccaacgatctgatgtcggttattatatctgccagactttaaatgttgccggaagt
atcatcacaaaagcatatttggaagttactgatgtgattgcagaccggcctccccccatc
attcggcaaggtcctgggaatcagactgtggcagtggatggtactgtagtgctcagctgt
gtggccacaggcagtccggtacccacgattctgtggagaaaggatggagtccttgtgtca
acccaagattctcgaatcaagcagctggagacaggagtgctacagatccgatacgctaag
ctgggtgacacaggtcggtacacctgcattgcatcgacccccagtggtgaagcaacatgg
agtgcttacattgaagtccaagaatttggagttccagttcagcctccgagacccactgac
ccaaatttaatccctagtgccccctcaaaacccgaagttacagatgtcagcagaaataca
gtaacattgtcatggcaaccaaatttgaattcgggtgcaactccaacatcttatattata
gaagccttcagccatgcatctggtagcagttggcagactgtagccgagaacgtgaaaaca
gaaacatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggca
gcaaatgcgtatggaattagtgatccgagccagatatcagacccagtgaaaacgcaagat
gttcccccaacgagtcagggagtagatcacaagcaggtccagagagagctgggaaatgtt
gtactgcacctccacaaccctaccatcctttcttcctcttcaatcgaagtgcactggaca
gtggaccaacagtctcagtatattcaaggatataaaattctttatcggccatctggagcc
aaccatggtgaatcggagtggttagtttttgaagtgaggaccccagccaaaaatagcgtg
gttatccctgatctcagaaagggggtcaactatgaaattaaggctcgtcctttttttaat
gaatttcaaggagcagatagtgaaattaaatttgccaaaaccttagaagaagcacccagt
gccccaccccaaagtgtaactgtatcaaagaatgatggaaatggaactgcaattcttgtt
agttggcagccgcctccagaagacactcagaatggaatggtccaagagtataaggtttgg
tgtctgggcaatgaaactcgctatcatataaacaagacggtggatggctccaccttttct
gtggtcattccttctctggttcctgggatccgatacagtgtagaggtggccgccagcact
ggggccggggctggggtgaagagtgaaccacagttcatccagttagattctcacggaaac
cccgtgtcacctgaagaccaagtcagccttgctcagcagatctccgatgttgtgaagcag
ccagcattcattgcaggaatcggggcatcctgttggatcatcctcatggtctttagcatc
tggctgtatcgacaccggaaaaagagaaatggactgaccagtacttacgcgggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggtgaagctgtg
agcagtggagggaggccaggacttctgaacatcagcgaacctgccacgcagccgtggctg
gcagacacgtggcccaatactggcaacaatcacaatgactgctccatcaattgctgcacg
gcaggcaacggtaacagtgatggcaacctgaccacctacagtcgcccagctgattgtata
gccaattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaact
gtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagccca
aatctgaaggatgggcgttttgtcaatccatcagggcagcccactccttacgccaccacc
cagctcatccagtcaaacctcagcaacaacatgaacaatggcagtggggactccagcgag
aagcactggaaaccgcctgcacagcagaaacaggaagtggcccccattcagtataacatc
atggagcaaaacaaactgaacaaagattatcgagcaaatgacacaattcctccaactatc
ccatacaaccaatcatacgaccagaatacaggaggatcctacaacagctcggaccggggc
agtagtacatctgggagtcaagggcacaagaaaggggcacggacacccaaagtaccaaaa
cagggtggcatgaactgggcagacctgcttcctcccccgccagcgcatcctccacctcac
agcaatagtgaagagtacagtatttccgtagacgaaagctatgaccaagaaatgccgtgt
cccgtgccaccagcaaggatgtatttgcaacaggatgaactagaagaggaggaagatgag
cgaggccccactccccctgtgcggggagcagcttcttctccagctgcggtgtcttatagc
catcagtccactgccactctgaccccctccccacaagaagaactccagcccatgttgcag
gactgcccggaggagactggccacatgcagcaccaacccgataggagacggcagccggtg
agcccccctccaccaccacgaccgatttccccaccacatacctacggatacatttcagga
cctcttgtctcagatatggatacagatgcgccagaagaggaagaagatgaagcggacatg
gaagttgccaagatgcagaccagacggcttttgttacgtggccttgagcagacccctgcc
tccagtgtgggggaccttgagagctctgtcactgggtccatgatcaatggctggggctca
gcctcagaggaggacaacatttccagtggacgttccagcgtgagttcttctgatggctcc
ttcttcaccgatgctgattttgcccaggcagtggcagcagctgcggagtatgctggtctg
aaagtcgcacgtcgtcaaatgcaggatgcttctggccgccgccattttcatgcgtcccag
tgccctcgacccacaagtcctgtttctacagacagcaacatgagtgctgctcaaatacag
aaggccagaccagccaagaagcaaaaacaccagccaggacatctgcgcagagaagcctac
acagatgatcttccacctcctccagtgccaccacctgccataaagtcacccactgtccag
tccaaggcacagctggaggtgcgacctgtaatcgtgccaaaactcccttctatagaagca
agaacagacagatcatcagatagaaaagtaggcagttacaaggggagagaagtattggat
ggaagacaagttgctgatatgagaaccaatctgggtgataccagagaagcacaggaacag
caaaatgatggcaaaggacgaggaaataaggcagcaaaacgagaccttccaccagcaaag
actcacctcatccaagaggatattctaccttactgtagacctacttttcctacatccaat
aatcccagagatcctagttcttcaagctcaatgtcatcaagaggatcaggaagcagacaa
agagaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaagttcttggaggatat
gaaaggggagaagataataatgaagaattagaggaaactgaaagctga
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