Neomonachus schauinslandi (Hawaiian monk seal): 110571236
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Entry
110571236 CDS
T08474
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X2
KO
K16499
protocadherin delta 2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110571236 (PCDH18)
Cell adhesion molecules [BR:
nsu04515
]
Cadherins
Protocadherins
110571236 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
PAH
Syndecan
ATG31
Cadherin_C_2
MPS-4
BBS1
PepSY
DUF3418
Motif
Other DBs
NCBI-GeneID:
110571236
NCBI-ProteinID:
XP_021535020
EnsemblRapid:
ENSNSCG00000021758
UniProt:
A0A2Y9GA63
LinkDB
All DBs
Position
2:87807916..87822294
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AA seq
1134 aa
AA seq
DB search
MCQMNAKMHFRFVFALLMLSFSYDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSLLKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFAVEARDGGSPKQLASNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIVAGNEENIFLIDPRSCDIHTNMSMESVSYTEWELSVIIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTMNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHHSHQSLNSLVTISSNHVPESFSLELTHATPAVEVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGF
SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQQ
HPHQSLEEDAQPADAGEKKKSFSTFGKDSPNEEDSGDTSTSSLLSEMSSVFQRLLPPSLD
TYPECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSVQP
SSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaaatgaatgctaaaatgcactttagatttgtttttgcactcctgatgctatct
ttcagctatgatgtactgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatccgtaattgcaagactatcagaggatgtggctgatgttttagttaagctacctaat
ccttccaccgttcgctttcgagccatgcaaaggggaaattctcctctccttgtagtaaat
gaggataacggagaaatcagcataggggctaaaatcgaccgtgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccactgagcatctgcagctt
ttccatattgaagtcgaagtgctggatattaatgacaattctccccagttttcaagatct
gtcatacctattgagatatctgagagtgcagcagttgggactcgcatccctctggacagt
gcatttgatccagatgttggggaaaattccctccacacgtactctctctctgccaatgat
ttttttaatattgaggttcggaccaggacggatggagccaagtatgcagaactcatagtg
gtcagagagctggatcgggagctgaagtcaagctatgagcttcagctcactgcctcagac
atgggggtgcctcagaggtctggctcatccctactaaaaataagcatttccgactccaat
gacaacagccctgcttttgagcagcagtcttatataatacaactcttagaaaactcccct
gttggcactttgctccttgatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtatattccttcagcagtcatgtgtctcccaaaattatagagacttttaaaatcgat
tcagaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataagcctgaaattaacataaacctcatgtcc
cccggaaaagaagaaatatcttatatctttgaaggggatcctatcgacacatttgttgct
ttggtcagggttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaactgcagaaaacttacgaaaacaattatttaatcttgacgaat
gccacactggatagagaaaagagatctgaatacagtttgaccgtaatcgctgaggacaag
gggacacccagtctttctacagtaaaacattttactgttcagatcaatgatataaatgac
aatccaccccacttccagagaagtcgatatgaatttgcaatctcagagaataactcgcca
ggggcatatatcaccactgttacagccacagatcccgatcttggagaaaacggccaggtt
acatataccattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatctaatggagccatctatgccctcagaatctttgatcatgaggaagtgagtcag
atcacttttgcggttgaagcgagagatggaggaagtccaaagcaactagcaagcaatacc
acagttgtgctcaccatcattgatgaaaatgacaatgtccctgtggttatagggcctgcg
ctgcgcaataatactgcagaaatctccatacccaaaggggccgaaagtggctttcatgtc
acgagaataagggcaattgacagagactctggtgtgaatgctgaactcagttgctccatc
gtagcaggtaatgaggagaatatttttttaattgatccacgatcatgtgacatccatacc
aacatgagcatggaatctgtttcctacacagaatgggagctctcagtcatcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtatgatctttgaatatgca
gagtcagtgacgagcacagcaatgacctcagtaagccaggcatctttggatgtctccatg
attataattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gcaactaggtgtaaccgagaaaagaaagacaccagatcctacaactgcagggtagcagag
tccacttaccagcaccacccaaaaaggccatccaggcagattcacaaaggggacattaca
ttggtgccgaccatgaatggcactctgcccatcagatctcatcacagatcgtctccatct
tcgtctcccaccttggaaagagggcagatgggcagccggcagagtcaccacagtcaccag
tccctcaacagtttggtgacaatctcatccaaccacgtgccagagagtttctcattagaa
ctcacccatgccactcctgctgttgaggtctcccagcttctttcaatgcttcaccagggg
cagtatcagccaaggccaagttttcgaggaaacaaatattccaggagctatagatatgcc
ctccaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagcagga
gacagtgattatgatttggggcgagattcaccaatagataggctgctgggtgaaggattc
agtgacctgtttcttacagatggaagaattccagcagctatgaggctttgcacggaggag
tgcagggtcctgggacactctgaccagtgctggatgccaccgctgccctcgccatcctcc
gactatcggagtaacatgttcattccgggggaggaattcccagcgcaaccccagcagcag
catccgcatcagagtcttgaggaggacgctcagcctgcagatgcaggtgagaagaagaag
agtttttccacctttgggaaggactcgccaaacgaggaggactccggggataccagcaca
tcctctctgctctcggaaatgagcagcgtgttccagcgcctcttacccccttccctggac
acctatcctgagtgcagcgaggtggatcggtccaactccctggaacgtcgcaagggacct
ttgccagccaagacggtgggttacccgcaaggcgtggccgcctgggcagccagtacacat
tttcagaatcccaccaccaactctggtcccccacttggaactcactccagcgtgcagcct
tcttcgaaatggctgccggccatggaggagatccccgaaaattatgaagaagatgatttt
gacaatgtgctcaaccacctgaacgacgggaaacacgaactcatggatgccagtgagcta
gtggctgagattaacaaactgcttcaagatgtccgccagagctag
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