Neomonachus schauinslandi (Hawaiian monk seal): 110572030
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Entry
110572030 CDS
T08474
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110572030 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110572030 (TGFBRAP1)
Membrane trafficking [BR:
nsu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110572030 (TGFBRAP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
110572030
NCBI-ProteinID:
XP_021535955
UniProt:
A0A2Y9GD07
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Position
10:complement(83228066..83270423)
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AA seq
859 aa
AA seq
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MMSTKAFTLVSAVGWELLAGDKERVHVECVECCGKNLYVGTRDCVVHHFLLEERALPTGT
ATFSAAKQLHRHLGFRKPVNELRAASALNRLLVLCDNSITLVNMMSLEPVPSGARIKGAA
ALALNENPVNGDPFCVEVCIISVKRRTIQLFLVYEDRVQIVREVSTPEQPLAVAVDGDFL
CLALTTQYIILNYNTGFSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAICFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQDK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENSCLLTDSA
AWLEKHNKYFALGLLYHYNNQDAAAVQLWVNIVNGDIHDSTRSDLYEYVVDFLTYSLDQD
LVWKYADWVLQKSEEVGVQVFTKRPLDEQQNSFNPDSVITCLKKYPKALVKYLEHLVIDR
SLQKEEYHTQLALLYLDEVLRQKSGTSSKAAEASEIQLKLQHLLQKSDLYRVHLLIDRIR
GAGLPMESAILHGKLEEHEEALRILVHELRDFAAAEDYCLWRSEGRDPPYRQRLFHTLLA
MYLQPGPTAPELAMAATDLLNHHAADFDAARVLPLLPGTWSVQLLHPFLAGAVRNSVHTR
RTAQVALGLARSENLIYKYDKMKLKGSSVQLSDKKLCQMCQNPFCEPVFVRYPNGGLVHT
HCAASRHTNPSPPGPGART
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaccaaggccttcaccttggtctctgccgtgggctgggagctgctagcaggc
gacaaggagcgtgtgcacgtagaatgcgtggagtgctgcgggaagaacctctacgtgggc
accagggactgcgtcgttcaccacttcctgctggaggagcgggcgctgcccaccgggacg
gccaccttctctgccgccaagcagctgcaccgacacctgggcttccggaagccagtgaat
gagctgcgagcggcctcggccctcaacaggctgctggtgctctgtgacaactccatcacc
ctggtcaacatgatgagcctggagcccgtcccctcgggggcgcgcatcaaaggggccgcg
gcgctggccttgaacgagaaccctgtgaacggagacccgttctgcgtggaagtctgcatc
atctcggtcaagcgcaggaccatccagctgttcctggtatacgaggaccgggttcagatc
gtcagggaggtgtcaacgccggagcagcccctggccgtggccgtggacggcgacttcctg
tgcttggctctgaccacacagtacatcatcctgaactacaacacgggcttctcccaggac
ctgtttccttactgcagcgaggagaagcgccccattgtcaagaggatcgggagacaggag
ttcctcctggcaggtcccggaggactgggcatgtttgccacagttgctggtatatctcag
cgagcccccgtgcactggtcggagaatgtgatcggggcggccatttgcttcccatatgtc
atagcgctcgatgatgaattcatcacggtgcacagcatgttggaccagcagcaaaagcag
accctgccctttaaggaaggccacattctacaggattttgaaggaagagtgattgtcgcc
acaagtaaaggagtttacatcttggttcccttacccctggaaaagcaaatacaggatctt
ctagcaagccatagagtggaagaggctttggtgttagcaaaaggagcccggaggaacatt
ccaaaagaaaaatttcaggtaatgtacagaaggattctgcagcaggccgggtttatacag
tttgcacaacttcagttcctggaagctaaagagctcttcagaagcggccagcttgacgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcctcattcacacgatcc
catcctcctctccacgagtacgcggacctgaaccagctgacccagggggaccaagacaag
atggccaagtgtaagcgcttcctcatgagctacctgaacgaagtccgcagcacagaggtc
gccaatggctacaaagaggacatcgacacggccttgctcaagctatacgcggaggccgac
cacgacagtctgctggacctcctggtcaccgagaactcctgtcttctgacagacagcgct
gcttggctggagaagcacaacaagtattttgcacttggactgctctatcattataataac
caagatgctgctgccgttcagctctgggtgaacatcgtgaatggggacattcacgactcc
actcgctcagacctatacgaatatgtcgtcgacttccttacctacagcttagaccaggac
cttgtgtggaagtatgctgattgggtcctgcagaaaagtgaagaggttggagttcaagtt
ttcaccaagagacctttggatgaacagcagaacagtttcaacccagacagtgtaatcact
tgccttaagaaataccctaaagcccttgtcaagtacctggaacatctagtcatagacagg
agcttgcagaaggaagagtaccacacgcagctggccctcctctacctggacgaggtgctg
aggcagaagtccggcaccagcagcaaggctgcggaagcctcggagatacagctaaagctc
cagcacctgctccagaagtccgatttgtaccgcgtccacctgctgatagatagaatccgg
ggcgccgggctccccatggagagcgccatcctgcacgggaagctggaggagcacgaggag
gccctgcgcatcctggtgcacgagctgcgggacttcgcggcagccgaggactactgcctg
tggcgctcggagggcagggacccgccgtaccggcagcggctcttccacacgctgctggcc
atgtacctccagcccggccccaccgcgcccgagctggccatggccgccacggacctcctg
aaccaccacgcggccgacttcgacgccgcccgcgtcctgccgctgctgccgggcacctgg
tcggtgcagctgctgcacccgttcctggccggggccgtcaggaacagcgtgcacacccgc
aggaccgctcaggtggctctgggcctggccaggtccgaaaacctgatctacaagtacgac
aagatgaagttgaaaggaagctcagttcagctctcggacaaaaagctctgccagatgtgc
caaaatcccttttgtgagcctgtgtttgttagatatccaaatggtgggctcgtccacacc
cattgtgccgccagcagacacacgaaccccagcccccccggccccggcgcgcggacttga
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