Neomonachus schauinslandi (Hawaiian monk seal): 110572717
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Entry
110572717 CDS
T08474
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04514
Cell adhesion molecule (CAM) interaction
nsu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110572717 (LRRC4B)
04517 IgSF CAM signaling
110572717 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110572717 (LRRC4B)
Cell adhesion molecules [BR:
nsu04515
]
Immunoglobulin superfamily
NGL family
110572717 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
110572717
NCBI-ProteinID:
XP_044778215
UniProt:
A0A8M1MXM5
LinkDB
All DBs
Position
16:6106102..6125033
Genome browser
AA seq
690 aa
AA seq
DB search
MACARSSPCPPLPPGRMSWPHGALLFLWLFSPPLGTSGGGVAMTLAAGGGSPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVXXXXXXXFTTVTVETLETQPGEET
LQPRGTEKEPPGPTTDGVWGGGRPGDAAGPASSSTTAPAPRSSRPTEKAFTVPITDVTEN
ALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQHQLHKHHGPTRTVEIINVEDE
LPAASAVSVAAAAAAAGVGGVGGDSHLALPALERDHLNHHHYVAAAFKAHYSGNPSGGGC
GGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgcccgcagctccccgtgccccccactgccgcccggtaggatgtcctggccc
catggggccctgctcttcctctggctcttctccccacccctggggaccagcgggggcggc
gtggccatgacattggcggccggagggggctccccgccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacgcggagagagctggctgaggtc
ccggccagcatccctgtcaacacgcggtacctgaacctgcaggagaacggcatccaggtg
atccggacggacacgttcaagcacctgcggcacctggagatcctgcagctgagcaagaac
ctggtgcgcaaaatcgaggtgggtgccttcaacgggctgcccagcctcaacacgctggag
ctgttcgacaaccggctcacgacggtgcccacgcaggcctttgagtacctgtccaagctg
cgggaactctggctgcgcaacaaccccatcgagagcatcccttcgtacgccttcaaccgc
gtgccctccctgcggcgcctggacctgggcgagctcaagcggctggagtacatctcggag
gcggccttcgagggcctggtcaacctgcgctacctcaatctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagttggagctgtcaggcaaccgg
ctggacctgatccgccccggctccttccagggcctcaccagcctgcgcaagctgtggctc
atgcacgcccaggtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
caccgcctggagcgcgtccacctcaaccataacccctggcactgcaactgcgacgtgctc
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcccgctgc
cacgcgcccgccggcctcaagggccgctacatcggcgagctggaccagtcgcacttcacc
tgctacgcgccggtcatcgtggagccgcccacggacctgaacgtcacggagggcatggcc
gccgagctcaagtgtcgcacgggcacctccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaacgtcacggtgcaggacacgggccagtacacgtgcatggtgacgaac
tcggcggggaacaccaccgcctcggccacgctcaacgtctcggccgtnnnnnnnnnnnnn
nnnnnnnacttcaccaccgtgaccgtggagaccctggagacgcagcccggagaggagacc
ctgcagccgcgggggacggagaaggagccgccggggcccacgacggacggggtctggggc
gggggccggcccggggacgccgccggcccggcctcgtcgtccaccacggcgcccgccccg
cgctcctcgcggcccacggagaaggcgttcacggtgcccatcacggacgtgacggagaac
gccctcaaggacctggacgacgtcatgaagaccaccaagatcatcatcggctgcttcgtg
gccatcacgttcatggctgccgtgatgctcgtggccttctacaagctgcgcaagcagcac
cagctgcacaagcaccacgggcccacgcgcaccgtggagatcatcaacgtggaggacgag
ctgcctgccgcctcggccgtgtccgtggccgccgccgccgccgccgccggtgtgggcggc
gtcggcggggacagccacctggccctgcccgccctggagcgcgaccacctcaaccaccac
cactacgtggcggccgccttcaaggcgcactacagcgggaaccccagcggcgggggctgc
gggggcaagggccccccggggctcaactccatccacgaacctctgctcttcaagagcggc
tccaaggagaatgtgcaagagacgcagatctga
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