Neomonachus schauinslandi (Hawaiian monk seal): 110573843
Help
Entry
110573843 CDS
T08474
Symbol
FOCAD
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110573843 (FOCAD)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110573843 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
110573843
NCBI-ProteinID:
XP_044776390
UniProt:
A0A8M1MT65
LinkDB
All DBs
Position
13:45716209..45998237
Genome browser
AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGG
EKNIRNLYTIRNHPQPLITMLEHRPDCWPVLLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLTLLKVLLQPRVPGDPEQPSVLEQQILRLCCDMVPCLQVKDLIQT
TEVMLFIEEVYLSLLRHPVFWKIQLIQLTLQLLCVCEVSLTITGECSSLIHLLEHSVELL
KEDFPVELVTIGIALLLLQTPASQQKPILSLALKLLSVAGGQKIPRSSWVLVMPVLQILS
STALEDCISMHEEGPSRQQLALNLLEMVQQESYRDDHQKLSYKLAFPITSMYGSIFTAWR
ILEVMREESAASDWLFSIESLLPITTVIPVHVFLLLAHLLVEDQGQNLRQILKVTTLLAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLR
AVTLRLLTSLWEKQDRVYPELQRLMATSDVPSLSVGREVQWEKLIAKAASIRDICKQRPY
QHGADMLAAASQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKDPVVANAAYKSLSHFSAG
EHTILHLPEEIRPEIPTPDELDEDEDDEGDEKDVDLSIPGSCYLKLLSLTAPLVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDVSTYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPPAWLAY
MSRAYHAILQGRTGELDLQLKHGKEGPEEVQYKKGTAWLWVRDMLTEEITKAAAKESPVV
KGNALLALSSLAVIVSKHEASLSSDSEGVPEVQPNFLSMKEWVSMVSDTLLVIVDSHYQP
RGQLFSSFYYKSYSGENTASAIARSAAATALSLLVPVFMISCKEKVEEILNMLTARLPGK
PRADESQAVQIHMGLALGMFLSRLYEEKLSDISGQQMNLLLMKSLDALENCCFDPSLEYN
TGCILGVGLVLSLMSHSSQTESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCT
SAFSTGIIEAAEAEDIMNKLRMLVENNQQTSGFALALGNLVHGLSLCGHGKAEDLGHRLL
PAWIRIVLAQGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQSSHFQARLNEVIKTVTQ
VISVSGVIGLQSNALWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIRAAVGFFVTGGK
KGPESVPPSLLKVVMKPIATVGESHQYPPVNWAALLSPLMRLNFGEEIQQLCLEIATTQA
PSSQNAAALLGLWGTPPLVHGLSLNIKKYLLVSTPLWIKHVSDEQILGFVENVMVAVFKA
ASPLPHPELCTSALQGLSQAMKLPSPTHHLWSLLSEATGKIFDLLPNKIRRNDLELYVSI
AKCLSEMTDDEANRVAEITESNLEKAAFVRLYLVSQGRFPLMGLMDILSVAVRHREKDTV
AWMVVHSLYQARIVSHANTGVLKRMEWLLELMGYIRNIVYQSTSVQNVALNEALDFLLLL
FAIAVVTWADHAAPLLLGLSASWLPWHRENGPAGSASSFLGRSPMHRVTVQEVLTLLPSS
MPLLLQKEPWKEQTQKFIDWLLSIMESPKEGLSAKSRDLLKATLLSLRVLPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggcg
gtgggtcatcttattgctgcagtcctgaaggaaaatggtttttcagaaaagatccatcaa
tccacaaaccagactccggctttgaacttgctgtgggagaagtgttgcagtgataatgtg
gtggttcgaacagcctgctgtgagggtctagtggcccttgttgctcaggatcacgcagag
ttcagctatgtgctcaatgggatactcaacctgattccatcaaccaggaatacacatggc
ttgataaaagccattatgaaattattacaaatgcaagctcttaaggaaggacaaggtggg
gagaagaatattcggaatttatatactattagaaatcatcctcagcctttgatcactatg
cttgaacacagacctgactgctggccagtacttttgcagcagctgacggcttttttccag
cagtgccctgaaaggtcagaagtttcatgtatccaaataatggcaccatttctatggtat
ctatattgcgaaccatcccagttgcaagaatatgctaaattgcgactaacgctgctcaaa
gtcttacttcaaccgcgggttcctggtgacccagaacaaccatcagtcttggaacaacag
atacttcggctgtgttgtgacatggttccgtgtttgcaggtaaaagatttgatccagaca
acagaagtgatgctgtttattgaggaagtatatttaagccttctgcgtcatcccgttttc
tggaaaattcagcttatccagctgacccttcagctgctgtgtgtctgcgaagtcagctta
acaataactggggaatgctcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcacgattggaatagctttacttctgctacagact
ccagcaagtcagcagaaaccaatcctaagtctagctttgaagctcctctctgttgctggg
ggtcagaaaatcccaaggtcatcctgggtgctagtgatgccagttctgcagatactgtct
tctactgccttggaagactgtatatccatgcatgaagaaggtccttcgaggcaacagttg
gctttgaaccttttggaaatggtacagcaggagtcctacagagatgaccaccaaaagctc
tcctacaagctcgcgttccccataaccagcatgtatggatcaatatttacagcctggagg
atccttgaagtaatgagagaagagtctgcggccagtgactggctgttttccatagagtcc
ttgctccctattaccacagtgatccctgtgcatgttttccttttgttggctcacctcctt
gttgaagatcaaggacagaatcttcgccagatactgaaggtcactacattattagcccaa
gcagattcctctcaggtaccaaatctgattccagttttaatgttcaaattgggaagacca
ctggaacccgtgttatataatgacatcttgtatactttacctacacttggtgttcacaag
gtgtgtataggacagattctgcgagtgatccagcttcttggaaccactccacaactaaga
gctgtcactctgcgcttgttgacatctttgtgggaaaagcaggatcgtgtctaccctgaa
ctgcagcgtctcatggccacgtccgatgtaccttctctgtctgtgggcagggaagtccag
tgggaaaaactcatcgccaaagcagcatcaatcagagacatatgtaagcaaaggccctac
cagcatggagcggatatgttggcagccgcttcccaggtgttgaatgaatgcaccaaacct
gatcaagccactccggcagccttggtcctccaaggtcttcacgcgctctgccaagcggag
gtcgtttgcattcgctcaacttggaacgcgctctccccaaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttttctctcgttccttccttaacagtcaat
acggctgaatatgagaattttaaagttcaagtcctcagcttcctctggacccacactcaa
aacaaggaccccgttgtggcaaatgccgcatataaatctctgtcacacttcagtgctgga
gaacacaccattcttcatctgcctgaggagataagacccgaaatccctactcccgatgag
ctagatgaagacgaagatgatgagggcgatgagaaggatgtggatctttctattcctggc
tcttgctatctcaaactgttgtcacttactgctcctttggtcttaccagctttggaggaa
ttttttacatctcttgtgaagcaggaaatggtgaatatgccccgaggagtgtatcactct
gcattaaaaggaggtgtccggtcagaccaaggaaaaactgtagcaggaatccccaatttt
atattgaaaatgtatgaaaccaataagcagccaggtctgaaacctggccttgcgggtggt
atgttattttgttacgatgtttcaacctatcagagtaaagatggcaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacctcacttgctctagtgcatgaggtt
cacatccagctttccgagtggcaccgggcaatctttctgccaccggcctggcttgcatat
atgagtcgagcttatcatgccattttacagggcaggacaggagagctggatttgcagttg
aaacacgggaaagaaggacccgaggaggtgcagtacaaaaaaggcacagcctggctctgg
gtccgagacatgttgactgaggagatcaccaaggcggcggccaaggagagcccagtggtc
aagggcaacgcactgttagccttaagcagcctcgctgtcatcgtatccaaacacgaagcc
agtctctcttcagactcggagggggtcccggaggttcagcctaatttcctttcaatgaag
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccattaccaaccc
agaggacaacttttctcctcgttttattataaatcctattctggtgaaaacacagctagc
gcgattgcccgctccgctgccgccacggctttgtctctcctcgtgccagttttcatgatt
tcttgcaaagagaaggttgaggaaatcctaaacatgctgactgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcagatccacatgggccttgctttggggatgttt
ctctcgcgcttgtatgaggagaaactcagcgatatatctggccaacagatgaaccttctt
ctgatgaagtctctggatgccctggaaaattgctgctttgatcctagtcttgaatataac
acgggctgtatattgggcgttggacttgttctgtccctcatgagccacagcagccaaaca
gagtctcgagttcacgtggcagcatcgcttcggaagctctcgacgtacctagatgacagt
gggagccaaagcagaacatttcaggaggtcctggcctataccctcagctgcgtgtgtacc
tcagcgttcagtactgggatcattgaggctgcagaggctgaagatatcatgaacaagctt
cggatgttggtagaaaacaaccaacagacttcaggttttgccctggcgttaggaaaccta
gttcatggtttgtctctgtgcggacatggaaaagctgaggacttgggccacagactgctc
cccgcctggatcagaattgttctagcacagggcactcctacaatgctctgtttggcagcg
cttcacggcatggtggccttggtaggctctgaaggggatgtaatgcagctgaagtcagaa
gctatccagtcctctcattttcaagccagactcaatgaagtcattaaaactgtaactcag
gtcatcagtgtgtctggcgtgattggtcttcagtcaaatgctctctggcttctaggacat
cttcacctatctactctgtcctcaagtcagagtagaacctctgttcccaccgactacagc
tatctgcccgagagcagttttattagagcggccgtgggcttcttcgttacaggagggaaa
aaaggtcctgaatctgtgcctccttcccttctcaaagttgtgatgaaacccattgcaacg
gtcggagaaagccaccagtatcctcctgtgaactgggccgcgctcctttctccacttatg
aggctaaactttggagaagagatacagcagctctgccttgaaattgccacgacacaggca
ccatcatcccagaatgcagctgcgctcttgggactgtgggggacaccaccgctggtccac
ggcctcagcttgaatatcaagaaatacctcctggtgtctacacctctgtggataaaacat
gtctctgacgaacagatcctcggctttgttgaaaatgtaatggtggcagtttttaaagca
gcttccccacttccgcatcctgagttatgcacgagtgccttacaggggctgagccaggcc
atgaaactgcccagccctacccaccacctctggagtctgctctctgaagctactgggaaa
atttttgaccttctgccaaataagattcggagaaatgatctagagctgtatgtcagtata
gcaaaatgcctctcagaaatgacagatgatgaagccaatcgggttgccgagattactgag
agcaacctagaaaaggctgcctttgtcagactgtacttggtctctcaaggacgattcccc
ttgatgggcttgatggacatcctcagcgtcgctgttcggcaccgggaaaaagacacggta
gcctggatggtggtgcacagcctataccaggcacggattgtaagccacgccaacactggt
gtgttgaagagaatggaatggctcctggaattgatgggttacatcagaaatattgtgtac
cagtcaacatctgttcagaacgtggctctcaatgaggctttggatttcttgttgctgctc
tttgcaatcgcagtggtgacctgggcagaccacgccgcccctctcctccttggcctcagt
gctagctggttgccatggcatcgggaaaatggcccagctgggtcagcttcaagcttcctt
ggcaggagtccaatgcacagggtcactgtgcaggaggttctcactctccttccaagtagc
atgcctcttctgctgcagaaagagccgtggaaggaacagacccagaagttcattgactgg
ctcttgagcatcatggaaagccctaaagaaggcctctccgcaaaatccagggatcttttg
aaagctaccctgttgtccttgagagttctcccagagtttaagaagaaagctgtatggacc
agagcgtacggttggtga
DBGET
integrated database retrieval system
