Neomonachus schauinslandi (Hawaiian monk seal): 110574516
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Entry
110574516 CDS
T08474
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03083
Polycomb repressive complex
nsu04980
Cobalamin transport and metabolism
nsu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110574516 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
110574516 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110574516 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsu01009
]
110574516 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsu03036
]
110574516 (HCFC1)
03029 Mitochondrial biogenesis [BR:
nsu03029
]
110574516 (HCFC1)
Protein phosphatases and associated proteins [BR:
nsu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110574516 (HCFC1)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
110574516 (HCFC1)
HMT complexes
COMPASS/SET1 complex
110574516 (HCFC1)
MLL-HCF complex
110574516 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
110574516 (HCFC1)
Mitochondrial biogenesis [BR:
nsu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
110574516 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
110574516
NCBI-ProteinID:
XP_044767593
UniProt:
A0A8M1M571
LinkDB
All DBs
Position
X:1579415..1603933
Genome browser
AA seq
2099 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGEVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGQPQPAQVQFVCDKQEAAASLVTPAVGQQNGGVVRVCSNPPC
ETHETGTTHTATTATANMAGQHACSNPPCETHETGTTSTATTAVAGIGAGQQRDARRACV
AGPAAAVLRVSAAAGPSEGAQGSVKPSCQTRQTSVTSSTMTVMATGAAPCAAGPLLGPGL
AVGAGGHGPAFVQLAPVSGQVRAGVLGGKDGPVAGLSPLLAAGRQLEAHHTHTTNTPTMV
RSAMGAGAPGEARGTATPAYESSPGATVTVTALEALLCPSAPVSQVCSNPPCETHETGTT
STATTSNAGSAQRVCSNPPCETHETGTTHTPTTATSSGGAGQPEAGQQPPAGRPCETHQT
TSTGTTMSVSVGALLPDTVPSHRTLESGLEVAAAATVAPQAAASLLAPFPTQRVCSNPPC
ETHETGTTHTATTVTSNMSSNQDPPPAASDQGEVESTQGDSVNITGSSAVTTTVSSTLTR
AVTTVTQSTPVPGPSVPKISSMTEATPGALTTEVPIPATITVTIANTETSDMPFSAVDIL
QPPEELQASPGPRQQLPPRQLLQPASTPLMGESAEVLSASQTPELQAAVDLSSTGDPSSG
QEPASSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAA
EAAAQAAATEEAQALAIQAVLQAAQQAVMAGTGEPMDTAEAAAAVTQAELGHLSAEGQEG
QATTIPIVLTQQELAALVQQQQQLQEAQAQQQHHHLPTEALAPADSLNDPTIESNCLSEL
AAAVPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPD
LPPPPSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGTVPDYNQLKKQEL
QPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVT
SGKIIEYSVYLAIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTK
PAIIFRIAARNEKGYGPATQVRWLQETSKDSSGAKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggttctcctgcagccccgctggaag
cgagtggtgggctggtcgggtccagtgccccggccccgccacggccaccgagccgtggcc
atcaaggaactcatcgtggtgtttggcggcgggaacgaggggatagtggacgaactgcac
gtgtacaacacggcgactaaccagtggttcatcccagccgtgagaggggacattcccccc
gggtgtgcagcctatggcttcgtgtgtgatgggactcgcctgctggtgtttggtgggatg
gtggagtatgggaaatatagcaatgacctctatgagcttcaggcaagccggtgggaatgg
aagagactcaaagcaaagacgcccaaaaacggaccccctccgtgccctcggcttgggcac
agcttctcccttgtgggcaacaagtgctacctgtttgggggtctggccaacgatagtgag
gaccccaagaacaacattccgaggtacctgaatgacttatacatcctggaattgcggcca
ggctccggagtggtagcctgggacatccccatcacttacggcgtcctgcctccaccccgg
gagtcacatactgctgtggtctacactgagaaagacaataagaagtccaagctggtgatc
tatggagggatgagtggctgcagactgggggacctctggaccctggacattgagactctg
acgtggaataagcccagtctcagcggggtggcacctcttcctcgaagccttcactcagcc
acaaccataggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggagaccatcctgatggacacgctggaggacaatattcctcgg
gcccgagctggccactgtgctgtagccatcaatacccgcctgtacatatggagtgggcgc
gacggctaccgaaaggcctggaacaaccaggtctgctgcaaggacctctggtacctggag
acagaaaagccaccgcccccggcgcgggtacagctggtacgagccaacaccaactccctg
gaggtgagctggggggcagtggcgacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgctactgccacctcccccacacccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgccccagcagcagccgcacctgccgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgccgccgcgcccccgaccaccaccacc
atccaggtcttgccgacagtgcctggcagctcgatttccgtgcccactgcagccaggact
caaggtgttcccgctgttctgaaagtcaccggtcctcaggcaacaacaggaaccccattg
gtcaccatgcgacctgccagccaggctgggaaagcccccgtcaccgtgacctcccttcct
gcaggcgtgcgaatggttgtgccaacgcagagtgcccaggggacggtgatcggcagcagc
ccacagatgagtggtatggctgcgctggcagccgcggccgccgccacacagaagatccct
ccttcctcggcgcccacggtgctgagtgtcccggcgggcaccaccatcgtcaaaaccgtg
gctgtgacgcctggcaccaccaccctcccggctaccgtaaaggtggcctcctcgccagtc
atggtgagcaacccagccactcgaatgctgaagactgcagctgcccaggtggggacgtca
gtctcctctgctgccaacacatccacccgccccatcatcacagtgcacaagtcagggact
gtgacagtggcccagcaagcccaggtggtgaccacagtggtgggtggagtcaccaagacc
atcaccctggtgaagagccccatctctgtcccaggaggcagtgctctgatttccaacctg
ggcaaagtgatgtcagtggttcagaccaaaccggttcagacttcggcagtcacgggccag
gcgtctacgggcccagtgactcagatcatccagaccaaagggcccctgccggccgggacc
atcctgaagctagtgacctccgcagatggcaagcccactaccatcatcactaccacgcag
gccagcggggctgggactaagcccaccatcctgggcatcagcagcgtgtccccgagcacc
accaagcctggcacgaccaccatcatcaagaccatccccatgtcggccatcatcacgcag
gctggtgccacaggcgtgaccagcagtcctggcatcaagtcccccatcaccatcatcacc
accaaagtgatgacttcgggaacaggagcacctgccaaaatcatcacagctgtccctaaa
atcgccactggccacgggcagcaaggagtgactcaggtggtgctaaagggggcccctgga
cagccgggcaccatcctccgtaccgtgcccatggggggtgtccgcctggtcactcctgtc
actgtctctgccgtcaagccagctgtcaccacgttggttgtgaagggcaccacaggcgtc
acaaccctcggcacagtgacaggcaccgtttccaccagccttgccggagctgggggccac
agtaccagcgcctccctggccacacccatcaccaccttgggcaccatcgccaccctctct
agccaggtgatcaaccccactgccatcaccgtgtcagctgcacagaccacgctgacagcg
gctggcgggctcaccacccccaccattaccatgcagcctgtctcccagcctacccaggtg
actctcatcacggcacccagtggcgttgaggcccagcctgtgcatgacctccccgtgtcc
attctggcctcgcctactacagagcagcccacggccacggtcaccattgctgactcgggc
cagggggaggtgcagccaggcaccgtgacactggtctgctccaacccgccctgcgagacg
cacgagacgggcaccaccaacacggccaccaccaccgtcgtggctaacctcggggggcag
ccccagcccgcgcaagtgcagttcgtctgtgacaagcaggaggccgctgcttctctcgtg
accccagccgtagggcagcagaacggcggcgtggtgcgcgtctgctccaacccgccctgc
gagacccacgagacgggcaccacgcacacggccaccactgccacggccaacatggccggg
cagcacgcgtgctccaacccgccctgcgagacgcacgagacgggcaccaccagcactgcc
accacggccgtggccggcatcggcgccggccagcagcgggatgcccggcgtgcctgtgtg
gccggccccgcggctgccgtgctgcgcgtgagcgcggctgccgggccgtcggagggagcc
cagggctccgtgaagccctcgtgccaaacgcgccagaccagcgtgacgagcagcaccatg
actgtgatggccaccggagcggccccgtgcgcggctggcccgctcctcgggccgggcctg
gcggtgggggccggcggccacggccctgctttcgtgcagctagctcctgtgagcggccag
gtcagagccggcgtccttggaggcaaggatggccccgtggccggcctgagcccgctgttg
gctgcggggcgccagctggaggcccaccacacgcacacaaccaacacccccaccatggtc
cgctccgccatgggcgccggggcgcccggcgaggcacggggcaccgccacgcccgcgtac
gagagctcgccgggcgccaccgtgactgtgacggccctggaagcgctgctgtgcccctcg
gcccccgtgagccaagtgtgctccaacccgccctgcgagacccacgagacgggcaccacc
agcactgccactacctcgaacgcgggcagcgcccagcgggtctgctccaacccgccctgc
gagacccacgagacaggcaccacgcacacgcccaccacggccacctccagtgggggtgcg
ggccagcccgaggcggggcagcagccccctgccggccgtccctgtgagacccaccagacc
acttctactggtaccaccatgtccgtcagtgtgggtgccctgctccccgataccgttccc
tcccacaggaccctagagtccggcctggaggtggcagcagcggccaccgtcgccccccag
gccgctgcttcgttgctggctcctttcccgacacagagggtctgctccaaccccccctgt
gagacgcacgagaccgggaccacgcacacggccaccacggtcacctccaacatgagctcg
aaccaagatcccccaccagccgccagtgaccagggagaggtggagagcacccagggtgac
agcgtgaacatcaccggctccagtgccgttacaacgactgtgtcctctacactgacgcgg
gctgtgaccactgtgacacagtccacgccggtcccgggcccctcggtgccgaagatctca
tcaatgactgaggctaccccaggggctctgaccaccgaagtccccatcccggccacgata
acagtgaccatagccaacacagaaacttctgacatgcccttctctgctgttgacatcctg
cagcccccagaggaactccaggcctcgccagggcctcgccagcagctgccgccacggcaa
ctcctgcagcccgcctccacacccctgatgggggagtccgccgaggtcctgtcagcctcc
cagacccctgagctccaagccgccgtggatctgagcagtacaggggacccgtcttcgggc
caggagcctgccagctcagccgtggtggccactgtggtggtccagccgcccccgcccaca
cagtctgaagtagaccagttgtcccttccccaggagctgatggctgaggcccaggcgggc
accaccaccctcatggtgacggggctcacccctgaggagctggcggtgactgctgctgcc
gaagcggccgctcaggccgcagccacggaggaggcccaagccctggccatccaggcggtg
ctccaggccgcacagcaggccgtcatggcaggcaccggggagcccatggacacggccgag
gcagcggcggctgtgacgcaggcggagctgggccacctgtcggctgaaggccaggagggc
caggctaccaccatccccatcgtgctgacgcagcaggagctagcggccctggtccagcag
cagcagcagctgcaggaggcgcaggcccagcagcagcaccaccacctccccaccgaggcc
ttggcccctgccgacagcctcaacgacccgaccatcgagagtaattgcctcagtgagctg
gctgcggccgtccccagtaccgtggccctgctgccctccacggccaccgagagcctggct
ccatccaacacatttgtggccccccagccggtggtggtagccagccccgcaaagctgcag
gctgcggctaccctgactgaagtggccaatggcatcgagtccctgggtgtgaagccagac
ctaccgcccccgcccagcaaagcgcctgtgaagaaggagaaccagtggtttgatgtgggg
gtcattaagggtaccaatgtaatggtgacacactatttcctgccaccagatgatgctgtc
ccttctgatgatgactcgggtaccgtccccgactacaaccagctgaagaagcaggagctg
cagccgggcacagcctataagttccgagttgctgggatcaacgcctgcggccgggggccc
ttcagcgagatctcagcctttaagacctgtctgcctggtttcccaggggccccctgtgcc
attaagatcagcaaaagtccagatggtgctcacctcacctgggagccgccgtctgtgacc
tctggcaagatcatcgagtactcggtgtacctggccatccagagctcgcaggccggtggt
gagcccaagagttccaccccggcccagctggccttcatgcgggtgtactgcgggcccagc
ccctcctgcctggtgcaatcctccagcctctccaacgcccacattgactacaccaccaag
cccgccatcatcttccgcattgccgcccgcaatgagaagggctatggcccggccacccaa
gtgaggtggttgcaagaaaccagtaaagacagctctggcgccaagccagccagcaagcgg
cccatgtcctctccggaaatgaaatccgctccaaagaaatctaaggcagatggtcagtga
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