Neomonachus schauinslandi (Hawaiian monk seal): 110574995
Help
Entry
110574995 CDS
T08474
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04340
Hedgehog signaling pathway
nsu05200
Pathways in cancer
nsu05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110574995 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110574995 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
110574995 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
110574995
NCBI-ProteinID:
XP_021539513
UniProt:
A0A2Y9GK06
LinkDB
All DBs
Position
4:complement(34393216..34407883)
Genome browser
AA seq
1207 aa
AA seq
DB search
MARPPPLQELPPGYTAPARAASPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGDEAAYTSQMLIQTPL
QEGENVLTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGIPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPSAPNHHGKQAPNVAQELSGGCHGFSHKFMHWQEELLLG
GISRDPRGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEERAVTVLQAWQRRFV
QLAQEALPQNSSQQIHAFSSTTLDDILHAFSEVSAARVAGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE
APPGTPLQERTGECLQRTGTSVALTSINHMVAFFMAALVPIPALRAFSLQAAIVVGCNFA
AVMLVFPAVLSLDLRRRHCQRLDVLCCFSRPCSARVIQILPRELADGTGPVGIAHLTATV
QAFAHCEASSQHVVTILPPRARLVPPPSDPLDSELFSPGGSTRDLLSQEEGTRQKATCSS
LPCARWSLAHFARYQFAPWLLQAHSKAMVLVLFGALLGLSLYGATLVQDGLALTDVVPRG
TKEHDFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPRT
WLHYYRNWLQGIQAAFDQDWASGRISHHSCRNGSEDGALAYKLLIQTGDAQEPLDFSQLT
TRKLVDKEGLIPPELFYVGLTMWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIP
AAQPLEFAQFPFLLHGLQKTADFVEAIEGARAACAEAGRAGVRAYPTGSPFLFWEQYLGL
RRYFLLAICILLVCTFLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVV
ILVASVGIGVEFTVHVALGFLTTQGSRNLRAACALECTFAPVTDGAVSTLLGLLMLAGSN
FDFIIRYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEVVQMYKESPEVLSPPAPQEGG
LRWGLSPTLPQSFARVTTSVTVALHPPPLPGAYIHPASDEPPWSPVATPAASAPSSLSSR
GPCPATG
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccgccactccaggagctgccccctggctatacagccccagctcgagcc
gcatcaccccagatcctagctgggagcctgaaggctccactctggcttcgtgcttacttc
caggggctgctcttctctctgggctgtgggatccagagacactgtggcaaggtgctcttc
ctgggcctgttggcctttggagccctggcactgggtctccgcgtggccatcattgagaca
gacctagaacagctctgggtggaagtaggcagccgggtgagccaggagttacattacacc
aaggagaagctgggggacgaggctgcatacacctcccagatgttgatacagaccccactc
caggaaggggagaatgtcctcacacctgaggcacttggcctccacctccaggcagccctc
accgccagtaaagtgcaagtatcactctatggaaagtcctgggatttgaacaaaatctgc
tacaagtcaggaattcccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccgtgcgtgatcctcacccccctcgactgcttctgggagggagccaaactccaaggg
ggctccgcctacttgcccggccgtcctgacatccagtggaccaacctggatccagagcag
ctgctggaggaactgggcccctttgcctccctcgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctatgtggggcggccctgtcttcaccctgacgatctccactgc
ccgcctagtgcccctaaccatcacggcaagcaggctcccaatgtggctcaggagctgagt
gggggctgccacggcttctcccacaagtttatgcactggcaggaggaactgctgctgggg
ggcatctccagagacccccgaggacagctgctgagggcggaggccctgcagagcaccttc
ctgctgatgagtccacgccagctgtatgagcacttccgaggcgactaccagacgcatgac
atcggctggagcgaggagcgggccgtcacagtgctgcaagcctggcagcggcgctttgtg
cagctggctcaggaggccctgcctcagaattcatcgcagcagatccacgccttttcctcc
accaccctggatgacatcctgcacgccttctctgaagtcagtgctgcccgcgtggcggga
ggctatctgctcatgctagcctatgcctgtgtgacaatgctgcgctgggactgtgcccag
tcccagggtgcggtgggccttgcaggggtgctgctggtagccctggcagtggcctcgggc
cttgggctctgcgccctgcttggcatcgccttcaatgctgccactacccaggtgctgccc
ttcctggcactgggcatcggtgtggatgacatattcctgctggcacatgccttcacagag
gccccccctggcacccctctccaggagcgcacaggtgagtgtctgcagcgcacggggacc
agcgtggcgctcacatccatcaaccacatggtggccttcttcatggccgccctcgttccc
atccctgcactgcgggccttctccttgcaggcagccatagtggtcggctgcaacttcgca
gccgtgatgcttgtcttcccggcggtcctcagcctggacctgcgccggcgccactgccag
cgccttgatgtgctctgctgcttctctaggccctgctctgctcgggtgattcagattctg
ccccgggagctagcggatgggacaggaccagtgggcattgcccacctgacggccacagtt
caagccttcgcccactgcgaagccagcagccagcatgttgtcaccatcctgcccccccga
gcccgcctggtgcccccaccttccgacccactggactctgagctcttcagcccaggaggg
tccacacgggacctcctaagccaagaggaggggaccaggcaaaaggcaacctgcagctcc
ctgccctgtgcccgctggagtcttgcccatttcgcccgctatcagttcgcaccctggctg
ctccaggcgcacagcaaggccatggtgctggtgctctttggggctcttctgggcctgagc
ctctacggagccaccctggtgcaggacgggctggccctgacggatgtggtgcctcggggc
accaaggagcatgacttcctgagcgcccagctcaggtacttctccctgtacgaggtggcc
ctggtgacacagggtggctttgactacgcccactcccaacgcgccctctttgatctgcac
cagcgcttcagttctctcaaggccgtgctgccccctcctgccacccaggcgccccgcacc
tggctgcactattaccggaactggctacaggggatccaggctgcctttgaccaggactgg
gcttccgggcgcatcagccaccactcgtgccgcaacggctccgaggatggggcgctggcc
tacaagctgctcatccagaccggggatgcccaagagcctctggatttcagccagctgacc
acaaggaagctggtagataaggaggggctgattccacccgagctcttctacgtggggctg
accatgtgggtaagcagtgacccgctgggcctggcggcctcacaggccaacttctacccc
ccacctcccgagtggctacatgacaagtacgacaccaccggggagaaccttcgcatcccg
gcagcccagcccctggaatttgcccagttccccttcctactgcatggcctccagaagacc
gcggacttcgtggaggccatcgagggggcccgggcagcgtgcgccgaggcaggccgggcc
ggggtgcgtgcctaccccaccggctcccccttcctcttctgggagcaatatctgggcctg
cggcgctacttcctgctggctatctgcatcctgctggtatgcactttcctcgtctgtgcc
ctgctgctgctcaacccctggacggccggcctcatagtactggtcctggcgatgatgact
gtggagctctttggcatcatgggtttcctgggcatcaaactgagtgccatccccgtggtg
atccttgtggcctctgtaggcattggtgttgagttcacggtccacgtggctctgggcttc
ctgaccacccagggtagccggaacctgcgggctgcctgtgccctagaatgcacatttgct
ccagtgaccgatggggccgtctccacattgctgggtctgctcatgcttgctgggtccaac
tttgacttcatcataaggtactttttcgtggtgctaacagtgctcacactcctgggcctc
ctccatgggctcgtgctgctgcccgtgctgctctccatcctgggccccccaccagaggtg
gtacagatgtacaaggagagcccagaggtcctcagccccccagctccacaggaaggaggg
ctcaggtgggggttgtcccccaccctgccccagagctttgccagagtgactacctccgtg
acggtggccctccacccacccccactgcctggtgcctacatccatccagcctccgatgag
cccccttggtcccctgttgccacaccagctgccagcgcccctagcagcctcagttctagg
ggaccatgtccagccactgggtga
DBGET
integrated database retrieval system
