Neomonachus schauinslandi (Hawaiian monk seal): 110575049
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Entry
110575049 CDS
T08474
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110575049 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110575049 (PRPF38A)
Spliceosome [BR:
nsu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110575049 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
110575049 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
110575049
NCBI-ProteinID:
XP_021539579
EnsemblRapid:
ENSNSCG00000000645
UniProt:
A0A2Y9GQI1
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All DBs
Position
4:40994155..41009807
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagtgaaggatgcgcacagtatccacggcaccaatcctcagtatctg
gtggagaagataattcggacgcgaatctatgagtccaagtactggaaagaggagtgcttt
ggactgacggctgaacttgtagtcgataaagccatggagttgaggtttgttggtggtgtc
tatggtggcaacataaagccaactccctttctgtgtttgaccttgaagatgcttcaaatt
caacctgagaaggatatcattgtagagtttatcaaaaatgaagatttcaaatatgtccgt
atgttgggagcactttacatgaggctgacaggcactgcaattgattgctacaagtactta
gagcctctctacaacgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ctgatgcatgtggatgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
attctaccccggctacagaaacgttatgtgctagaggaagctgagcagctggagcctcgg
gtcagcgctctagaagaggacatggatgatgtggagtccagtgaagaggaggaagaggag
gatgagaagttggagagagtaccatcacctgatcaccgccggagaagctaccgagacttg
gacaagccccgtcgttctcccacattgcgctataggaggagtaggagccggtctcccaga
aggcggagtcggtctcctaaaaggaggagcccctcccctcgccgagaaaggcatcggagc
aaaagcccaagacgtcaccgcagcagatctcgagatagacggcacagatcccggtccaag
tccccaggtcatcaccgtagtcatagacacaggagccactcaaagtctcctgaaagatct
aagaaaagccacaagaagagccggagagggaatgagtaa
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