Neomonachus schauinslandi (Hawaiian monk seal): 110575190
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Entry
110575190 CDS
T08474
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03082
ATP-dependent chromatin remodeling
nsu04714
Thermogenesis
nsu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110575190 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110575190 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110575190 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110575190 (ARID1A)
03021 Transcription machinery [BR:
nsu03021
]
110575190 (ARID1A)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110575190 (ARID1A)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
Helix-turn-helix
ARID
110575190 (ARID1A)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110575190 (ARID1A)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110575190 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110575190
NCBI-ProteinID:
XP_021539819
UniProt:
A0A2Y9GR74
LinkDB
All DBs
Position
4:19509675..19578433
Genome browser
AA seq
2282 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGP
AVGPPQPLGKELQDGAESNGGGGGGGAGAGGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHH
APMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYPG
QPYGSQTPQRYPMAMQGRAQSAMGSLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQ
QQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQPPYSQQPSQPPHQQSPTPYPSQQS
TPQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQPQQTAYSQQRFPP
PQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSP
GVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAV
PGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGG
QMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGG
QMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAV
AMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSA
GMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPE
RKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATN
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSG
SMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTF
QKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGGMRKAPGSDPFMSSGQGPNGGMGDP
YSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEAGIGPEGNMGTGAPQPTLMPSNPDSGMY
SPSRYPPQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAK
RHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAAA
TERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRN
DMTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVP
PMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPA
SHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLA
ESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQR
TLLDPGRFSKASSPAPMEGEEEEDLLGPKLEEEEEEEVVENEEEMAFSGKDKAASESSEE
KLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKT
ELLPTRPHVPCPPVTRKHVTAAEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTLT
EEGAKNAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVC
VSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSC
NKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPF
STLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVC
REMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPF
EPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIG
QS
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggcccc
gccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggcggagccggcgccggcggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggcggcggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggccgccggctccaagccgcctccctcctccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctca
gcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgct
gcggcggcggcggcggcggcagcagccgcctcgggaggggcccaacaaaggagccaccac
gcgcccatgagccccgggagcagcggcggcggggggcagccgctcgcccggaccccgcag
ccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaac
ccatactcgcagcaacagggaccttcatcaggaccgcagcaaggacatgggtacccaggg
cagccatatgggtcccagaccccgcagcggtacccgatggccatgcagggccgggcgcag
agtgccatgggcagcctctcttatgcacagcagattcctccttacggacaacaaggcccc
agtgggtatggtcagcagggccagactccatattacaaccagcaaagtcctcacccccag
cagcagcagccgccctactcccagcagccgccgtcccagaaccctcacgcccagccttcc
tatcagcagcagccgcagtctcagcccccacagctccaggcttctcagcctccctattcc
cagcagccatcccagcctccacatcagcagtccccaactccatacccctcccagcagtcc
accccccaacagcacccccagagccagcccccttactcacagccgcaggcacagtctccc
taccagcagcagcaacctcagcagccagcctcctcgacgctttcccagcaggctgcgtac
cctcagccccagtctcagcagccacagcaaactgcctattcccagcagcgcttccctcca
ccacaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacc
tccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccctcaagcttg
cctgatctatctggttcaatagacgatctccccatggggacagaaggagctctgagccct
ggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtct
cctttctctcctcatacgtcccctcacctgcctggcatccgaggcccctccccgtcccct
gttggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtg
ccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatcct
tccatgaaccaatcgagcattgcccaagatcgaggttacatgcagaggaacccccagatg
ccccagtacagttccccccagcccggctcggccttatctccgcgtcagccttcgggtgga
cagatgcacacaggcatgggctcctaccagcagaactccatggggagctatggtccccag
gggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttgccc
aatgctaactaccccagtgcaggcatggccggaagtatgaaccctatgggtgctggaggt
cagatgcatgggcagcctggcatcccaccttatggcacactccctccagggagaatgagt
catgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggtt
gggtcagggatgtgtcccccaccagggggcatgaatcggaaaactcaagaaactgctgtc
gccatgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaat
caggggggcatgatgggaactggacctccctacggacaagggattaatagtatggctggc
atgatcaaccctcagggacccccgtatcccatgggtgggaccatggccaacaattcagca
gggatggcagccagcccagagatgatgggccttggggacgtcaagttaactccagccacc
aaaatgaacaataaggcagacgggacacccaagacagaatccaaatccaagaaatccagt
tcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgag
aggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatgaca
aatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaag
gagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaac
ctcaatgtgggcacctcaagcagtgctgccagctccttgaaaaagcagtatatccagtgt
ctctatgcctttgagtgcaagattgaacggggagaagaccctcccccagacatctttgca
gctgctgattccaagaagtcccagcccaagatccaacctccctctcctgcgggatctggg
tctatgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggaggagac
ctgaagccaccaactccagcatccacaccacacagtcagatcccccccttgccaggcatg
agcaggagcaattcggttgggatccaggatgcgtttcctgatggaagtgaccccacattc
cagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctctgac
atgatggggcgcatgtcctacgagccaaataaggatccttatggcggcatgaggaaagct
ccagggagcgatcctttcatgtcctcggggcagggccccaacggcgggatgggagacccc
tacagccgagctgccggccctgggctgggaaatgtggcgatgggaccgcgacagcactat
ccctatggagggccttatgacagagtgaggacggaggctggaataggacccgagggaaac
atgggcactggagccccacagccgactctcatgccttccaacccagactcggggatgtac
tctcccagccgctaccccccgcagcagcagcagcagcgacatgattcctatggcaatcag
ttctccactcaaggcaccccttccggcagccccttccccagccagcagaccacaatgtat
cagcagcagcagcagaattacaaacggccgatggacggcacatacggccctcctgccaag
cggcacgaaggggagatgtacagcgtgccgtacagcacggggcaggggcagccccaacag
cagcagttgccccccgcccagccccagcctgccagccagcagcaagccgcccagccttcc
cctcagcaagatgtgtacaaccagtatggcaacgcctatcctgccacggccgccgctgct
actgagcgccgaccagcgggcggcccccagaaccagtttccattccaatttggccgagac
cgtgtctctgcgccccctggctccaatgcccagcagaacatgccaccgcagatgatgggc
ggccccatacaagcatcggctgaggtcgctcagcaaggcaccatgtggcaggggcgtaat
gacatgacctacaattacaccaacaggcagagcactggctctgccccccagggccccgcc
taccatggcgtgaaccgaacagatgaaatgctgcatacggatcagagggccaaccatgaa
ggcccgtggccttcccatggcacacggcagcccccatatggtccctctgcccccgtgccc
cccatgacaaggccccctccttccaactaccagcccccgccaagcatgcagaatcacatt
cctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacctctcctagc
aagtctccattcctacactctgggatgaagatgcaaaaggcaggtcccccggtacctgcc
tcgcacatagcacctgcccccgtgcagccgcccatgattcggcgggacatcaccttccca
cctggctctgtggaagcaacacagcccgtgttgaagcagaggaggcggctcacgatgaaa
gacatcggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctgctggca
gagagcacatgggcattagacaccattaacatcctgctgtatgatgacaacagcatcatg
accttcaacctcagtcagctcccaggtttgctagagctccttgtggaatatttccgacgt
tgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgacccaggacagaga
acactactggaccctgggagattcagcaaggcgtctagtccagcccccatggagggggag
gaagaggaagaccttctaggtcctaaactagaggaggaagaagaagaggaagtagtggaa
aatgaggaggagatggccttctcgggcaaggacaaggcagcctcagagagtagtgaggag
aaactgattagtaagtttgacaagcttccagtaaagattgtgcagaagaatgacccgttt
gtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggcctgctgcac
tggcggattggtgggggggacaccactgagcatatccagacccactttgagagcaagaca
gagctgctgccaacccggcctcatgtgccctgcccaccagtcacccggaagcacgtcaca
gcagcagagggtactccagggacaacagaacaggagggccccccgcctgatggccctccg
gagaaacggatcacagccacaatggatgacatgctgtccacccggtctagcacgttgacc
gaggagggagctaagaatgcagaggccaccaaggagagcagcaagtttccattcggcatc
agcccggcacagagccaccggaacatcaagatcctagaggacgaaccccacagtaaagat
gagaccccactgtgtacccttctggactggcaggattccctcgctaagcgctgcgtctgt
gtctccaataccatccgaagcctgtcgtttgtgcccggcaacgactttgagatgtccaaa
cacccggggctgctgctgatcctgggcaagctgatcctcctgcaccacaagcacccagag
cggaagcaggcaccactgacttacgagaaggaggaggagcaggaccaaggggtgagctgc
aacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccctggtcacg
ctcgccaacatctcggggcagttggacctctccccgtaccctgagagcatttgcctgcct
gtcctggacggactcctacactgggcagtctgcccttccgctgaagcccaggaccccttc
tccaccctgggccccaacgccgtcctctccccccagagactggtcttggaaaccctcagc
aaactcagcatccaggacaacaatgtggacctgatcctggccacgccccccttcagccgc
ctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccggtgtgc
cgggagatggccgtggttctgctggccaacctggcgcagggcgacagcctggcagcccgc
gccatcgccgtgcagaagggcagcatcggcaacctcctcggcttcctggaggacagcctt
gctgccacccagttccagcagagccaggccagcctgctccacatgcagaacccgcccttc
gagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgctggccctggccaag
gtggacgagaaccactcggagttcacgctgtacgagtcacggctgttggacatctcggta
tcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttgattggc
cagtcatga
DBGET
integrated database retrieval system
