KEGG   Neomonachus schauinslandi (Hawaiian monk seal): 110575214
Entry
110575214         CDS       T08474                                 
Symbol
HDAC1
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nsu  Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03082  ATP-dependent chromatin remodeling
nsu03083  Polycomb repressive complex
nsu04110  Cell cycle
nsu04213  Longevity regulating pathway - multiple species
nsu04330  Notch signaling pathway
nsu04350  TGF-beta signaling pathway
nsu04613  Neutrophil extracellular trap formation
nsu04919  Thyroid hormone signaling pathway
nsu05016  Huntington disease
nsu05031  Amphetamine addiction
nsu05034  Alcoholism
nsu05165  Human papillomavirus infection
nsu05169  Epstein-Barr virus infection
nsu05200  Pathways in cancer
nsu05202  Transcriptional misregulation in cancer
nsu05203  Viral carcinogenesis
nsu05206  MicroRNAs in cancer
nsu05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:nsu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110575214 (HDAC1)
   03083 Polycomb repressive complex
    110575214 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    110575214 (HDAC1)
   04350 TGF-beta signaling pathway
    110575214 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110575214 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    110575214 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    110575214 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    110575214 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110575214 (HDAC1)
   05202 Transcriptional misregulation in cancer
    110575214 (HDAC1)
   05206 MicroRNAs in cancer
    110575214 (HDAC1)
   05203 Viral carcinogenesis
    110575214 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    110575214 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    110575214 (HDAC1)
   05165 Human papillomavirus infection
    110575214 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    110575214 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    110575214 (HDAC1)
   05034 Alcoholism
    110575214 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsu03036]
    110575214 (HDAC1)
Enzymes [BR:nsu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110575214 (HDAC1)
Chromosome and associated proteins [BR:nsu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110575214 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     110575214 (HDAC1)
    BRAF-HDAC complex
     110575214 (HDAC1)
    REST complex
     110575214 (HDAC1)
    SHIP complex
     110575214 (HDAC1)
    MiDAC complex
     110575214 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110575214 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110575214 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    110575214 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110575214
NCBI-ProteinID: XP_021539860
UniProt: A0A2Y9GPT1
LinkDB
Position
4:23959758..23992117
AA seq 482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQVIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKQEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcacccggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctacttaactatggtctctaccgaaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgacgactacattaaattcttgcgctccatccgc
ccagataacatgtccgagtacagcaagcagatgcagagattcaacgtcggtgaggactgt
ccagtatttgatggcctgtttgaattctgtcagttatctactggtggctctgtggcgagt
gccgtgaaactgaataagcagcagacggacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtctgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggt
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tacggagaatacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tattacgctgttaactacccgctccgagatgggatcgatgacgagtcctatgaggccatt
ttcaagccggtcatatctaaagtgatggagatgttccagcccagtgcagttgtcttacag
tgtggctccgactccctgtccggggatcggttaggctgcttcaatctgaccatcaaaggg
cacgccaagtgtgtggagtttgtgaagagcttcaacctgcccatgctgatgctgggaggg
gggggctacaccatccgcaacgtggcccgctgctggacgtatgaaacagccgtggccctg
gacacagagatcccgaatgagcttccatacaacgactactttgaatactttggaccagat
ttcaaacttcacatcagtccttccaatatgaccaaccagaataccaatgaatacctggag
aagatcaaacagcgactgtttgagaacctgagaatgctgccccacgcacctggggtccaa
atgcaggtgattcctgaggatgccattccagaggagagtggcgacgaggatgaagaagac
cctgacaagcgcatctcaatctgttcttctgacaaacgaattgcctgtgaggaagagttc
tcggactctgatgaggagggagaaggtgggcgcaagaattcttccaacttcaaaaaagcc
aagagagtcaaaactgaggatgaaaaagagaaagacccagaagagaagaaagaagtcaca
gaagaggagaaaaccaaggaggagaagcaagaagccaaaggggtcaaggaggaggtcaag
ttggcctga

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