Neomonachus schauinslandi (Hawaiian monk seal): 110575347
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Entry
110575347 CDS
T08474
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsu03036
]
110575347 (CHD5)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110575347 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110575347
NCBI-ProteinID:
XP_044769745
UniProt:
A0A8M1M9Q1
LinkDB
All DBs
Position
4:complement(3878609..3935049)
Genome browser
AA seq
1968 aa
AA seq
DB search
MGWGCHSNRLDVTIRACVPPPRRAAVPPALPPPPSAGCGTRAAGREEEDGGLGGFDDYFP
EEPVGLPKKKKSKKLKENRSKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKK
KLKDKKEKKAKRKRKDDDEDDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNY
KAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVT
IAPPLAISPQQAPQPVPIRKAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGI
SNKRKKGSSSEEDEREESDFDSASIHSSSMRSEGSTALGKKSKRRRKKKRIDDGDGYETD
HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDED
DEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT
CPPLKGKVQRILHWRWTEPPAPFVVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYW
HCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEER
FYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAY
WGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLH
PYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTI
INWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHV
LLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQN
NLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMP
AKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPV
AAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLE
YEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSD
WNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKS
GSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGST
PPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGV
EEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEW
QDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEV
LGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGAD
GAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSE
VISSDPNTPVPASPAHLLPTPLGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPASLDR
VEGEDKHESSDGKERLEEMEKAPPSPEQLPKEEVLPEKEKILDKLELSLIHSRGDGSDFR
PDDTKVEEKEPLETQQNGDKEEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAA
VSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKN
KFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKES
LAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNR
AGDPTIQQGAFGNSQMYNNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgggatggggttgccacagcaacagactggacgtcacaatccgggcatgtgtgccgccc
ccccgccgtgccgccgtgccgccggcgctgccgccgccaccctcggccggctgcgggact
cgggctgcggggcgcgaagaagaagatgggggcctcggaggctttgatgactatttccct
gaggagcccgtgggccttcccaagaagaagaaatccaagaagctcaaggagaaccggtcc
aaagggaagcggaagaagaaagaggggagcaatgatgagctgtcagaaaatgaagaggat
ctggaagagaagtcggagagtgagggcagtgactactcccctaataaaaagaagaagaaa
aagctcaaggacaagaaggagaaaaaagccaagcgaaaaaggaaggatgatgacgaggat
gataatgacgacgggtgtctaaaggagcccaagtcctcggggcagctgatggccgagtgg
ggcctggatgacgtggagtacctgttctcggaggcggactaccacacgctgaccaactac
aaggccttcagccagttcctcaggccgctcattgccaagaagaacccgaagatccccatg
tccaaaatgatgaccgttctgggagccaagtggcgggagttcagcgccaacaaccctttc
aaggggagctcggcagcagcagctgcagcggcggtggccgcggccgtggagaccgtcacc
atcgcccctccgctggccatcagcccccagcaggcaccccagcctgtacctatccgcaag
gccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagggtccaaggat
gcgaagaaaaagggcaaggggagaaaggtagccgggctcaagttccgctttggagggatc
agcaacaagaggaagaaaggctcctcgagcgaggaagatgagcgggaggagtcagacttc
gacagcgccagcatccacagctcctccatgcgctctgagggctccacagccctggggaag
aagagcaagaggcggcgcaagaagaagaggattgacgatggtgatggctacgagacggac
caccaggactactgtgaggtgtgccagcagggcggggagattatcctgtgtgacacctgc
ccgcgggcctaccacctcgtctgccttgatccagagctggagaaggctcccgagggcaag
tggagctgtccccactgtgagaaggaggggatccagtgggagccgaaggacgatgaggac
gacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgcgtg
tgcaaggacgggggtgaactgctctgctgcgacgcgtgcccctcctcctaccacctgcac
tgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgtact
tgccccccgctgaaaggcaaagtccagcggatcctacactggaggtggacagagccccct
gcccccttcgtggtggggctgccggggcccgacgtggagcctggtgtccccccacccaag
cccctggagggcatcccggagagagagttctttgtcaagtgggctgggctctcctactgg
cactgctcctgggtgaaggagcttcagctggagctataccacacggtcatgtaccgcaac
taccaaagaaagaacgacatggacgagccgccgccctttgactatggctctggcgatgag
gatggcaagagcgagaaaaggaagaataaggaccctctctatgccaagatggaggagcgc
ttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagc
ttcgacaagaagggggatgtgcactacctgatcaagtggaaagacctgccctatgaccag
tgcacctgggagatcgacgacatcgatatcccctactatgacaacctgaagcaggcctac
tggggccacagggagctgatgctgggtgaggatgctaggctgcccaagaggctggtcaag
aagggcaagaagctgaaggatgataaacaggagaagccaccagacacacccattgtggat
cccacggtcaagtttgacaagcagccttggtacattgactccacgggaggcacactgcac
ccataccagctggagggcctcaactggctgcgcttctcctgggcccagggcacagacacc
atcctggctgatgagatggggctgggcaagactgtgcagaccatcgtcttcctctactcc
ctgtacaaggaggggcactccaaggggccctacctggtcagcgcgcccctgtccaccatc
atcaactgggagcgtgagtttgagatgtgggcacctgacttctatgtggtcacctacacg
ggggacaaggagagccgctccgtgatccgggagaatgagttttcttttgaggacaacgcc
attcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatcaaatttcatgtc
ctgctcacctcctacgagctcatcaccatcgaccaggccattctgggctccatcgagtgg
gcctgcctagtggtggacgaggcccaccggctcaagaacaaccagtccaagttctttagg
gtcttgaacagctacaagatcgattataagctgctgctgacggggaccccccttcagaac
aacctagaggagctgttccatctcctcaacttcctgactccagagaggttcaacaatctg
gagggcttcctggaggagtttgccgatatctccaaggaagaccagatcaagaagctacac
gacctgctggggccacacatgctgaggcggctcaaggctgatgtattcaagaacatgccg
gccaagaccgagctgatcgttcgtgtggagctgagccagatgcagaagaagtactacaag
ttcatcctcacgcggaacttcgaggcactcaactccaaggggggtgggaaccaggtgtcg
ctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttccccgtg
gccgccgtggaggcccctgtcttgcccaatggctcctatgatggcagctccctggtcaag
tcttcaggcaagctcatgcttctgcagaagatgctcaagaagctgagggacgaagggcac
cgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaggacttcctggag
tatgagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaagag
gcgatcgacagattcaatgcccctggggcgcagcagttctgcttccttctctccacccgg
gcggggggcctgggcatcaacttggccacagcagacaccgtcatcatctacgactcggac
tggaatccacacaatgacatccaggccttcagccgtgcccatcgcatcggacagaacaag
aaggtgatgatctaccgcttcgtgactcgggcctcggtggaggagcgcatcacacaggtg
gccaagcgcaagatgatgctcacccacctggtggtacggcccggcctcggctccaagtcc
ggctccatgaccaagcaggagctggatgacatcctcaagttcggcacagaagagctcttc
aaggacgacgtggagggcatgatgtctcagggccagaggccggtcacgcccatccctgat
gtccagtcctccaaagggggagccctggctgccagcgccaagaagaagcatggcagcacc
ccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcggcc
atctccaagctgctggaccgaaaccaggacgccacggacgacacggagctgcagaatatg
aacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggcgtg
gaggaggtggagagggagatcatcaagcaggaggagaacgtggaccccgactactgggag
aagctcctgcggcaccactacgagcagcagcaggaggacctggcccgcaatctgggcaag
ggcaagcgcatccgcaagcaggtcaactacaatgacgcctcccaggaggaccaggagtgg
caggacgagctctcagataaccagtccgaatattccattggctccgaggatgaggacgag
gactttgaggaaaggccagaagggcagagtggacggcgacaatccaggaggcagctgaag
agcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaatatcgaggtg
ctgggcttcaatgcccgccagcggaaggcctttctgaacgccatcatgcgctggggcatg
cccccccaggatgccttcaactctcactggctggtgcgggatcttcgagggaaaagcgag
aaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggcgctgac
ggcgcagagaccttcgcagacggtgtgccccgtgagggcctctcgaggcagcacgtgctc
acccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcatgttaac
gggaagtacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagcgag
gtcatctcctcggaccccaacacgccagtgcctgccagccctgcccacctcctgccgacc
ccactgggcctgccagacaaaatggaagcccagctgggttacatggatgagaaggagctg
ggggttcagaagccaaagaagcccccagaaatccaggccctgccagcttccctggacaga
gtggagggcgaggacaagcatgagagctcagatggcaaggagcggctggaggagatggag
aaggccccgccatccccagagcagctgccgaaagaagaagtgcttcctgagaaggagaaa
attctggacaagctggagctaagcttgattcacagcagaggggatggcagtgatttcagg
ccagatgacaccaaagtggaggagaaggagccccttgaaacacagcaaaatggtgacaaa
gaggaagatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttcaac
attgcagacgggggcttcacagagctgcacacactgtggcagaatgaggaacgtgctgct
gtgtcctcggggaaaatctacgacatctggcaccggcgccatgactactggctgctggcc
ggcatcgtgacgcacggctacgcccgctggcaggacatccagaatgacccgagatacatg
atcctcaacgagcccttcaagtctgagatccacaagggtaactacttggagatgaagaac
aagtttctggcccgcaggttcaagctgctggaacaggcgctggtcatcgaggagcagctc
cggagggccgcgtaccttaacatgacccaggaccccaaccaccccgccatggccctcaac
gcccgcttggctgaggtggagtgccttgctgagagccaccagcacctgtccaaggagtcc
cttgccgggaacaagccggccaatgccgtcctgcacaaggtcctgaaccagctggaggag
ctgctgagtgacatgaaggcggatgtgacgcgcctgccctccatgctgtcccgcatcccc
ccggtggctgcccgcctccagatgtcggagcgtagcatcctgagccgcctgaccaaccga
gccggtgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaacaac
tttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatgccc
ctggggccctatgtgaccgatatctag
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