Neomonachus schauinslandi (Hawaiian monk seal): 110575423
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Entry
110575423 CDS
T08474
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04151
PI3K-Akt signaling pathway
nsu04510
Focal adhesion
nsu04512
ECM-receptor interaction
nsu04820
Cytoskeleton in muscle cells
nsu04974
Protein digestion and absorption
nsu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110575423 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110575423 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110575423 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110575423 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110575423 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110575423 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nsu00535
]
110575423 (COL9A2)
Proteoglycans [BR:
nsu00535
]
Extracellular matrix (ECM) proteoglycans
Others
110575423 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110575423
NCBI-ProteinID:
XP_021540100
UniProt:
A0A2Y9GQI2
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Position
4:complement(30472189..30487089)
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AA seq
688 aa
AA seq
DB search
MAAAAAPRSLLLLLQVLGLALAQIRGPPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGPKGEPGKAGLDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGITGPKGDPGPEGPSGPPGQPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGKRGALGDSGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMEG
PKGEMGPHGYKGMVGSIGAAGSPGEEGPRGPPGQAGEKGDVGSPGVRGPQGITGPKGATG
PPGIDGKDGAPGIPGMKGNAGQAGRPGNQGHQGLAGVPGQPGTKGDPGDKGEPGQQGLPG
FSGPPGKEGEPGPPGEIGPRGIVGQKGDQGERGPVGQPGPQGRQGPKGDQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGSVGDPGVAGLQGEKGEKGESGEPGPKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGLAGDRGVPGLPGRQGVAGRDASDQHIVTVMMKMMQEQLAEVA
VSAKREALGAVGMVGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRG
EKGDQGEMGRGHPGMPGPPGIPGLPGRPGQAINGKDGARGSPGVLGEAGRPGLPGPVGLP
GFCEPAACLGASAYTSARLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggccgccccccgcagcctcctgctgctcctccaggtgctcgggctcgcg
ctggcgcagatcagaggtccgccaggagaaccggggcccccgggccccccagggccgccg
ggagtgcctggatctgacggcatcgacggagacaaggggcccccggggaaagctggccct
ccgggacctaagggagagcctggcaaagcagggctggatgggccggacgggaagcctgga
attgatggtctaactggagccaagggggagcctggccccatggggatccctggagtcaag
ggccagcccgggctcccaggtccccctggcctgccgggccctggctttgctggacctcct
gggccacctggacctgtcggcctcccgggcgagattggaatcacaggccccaagggggat
cctggaccagaggggccatcggggcccccggggcaacccggcaaaccgggccgacccgga
accatccagggcctggaaggcagcgcggatttcttgtgtccgaccaactgtccagcgggg
gtgaaaggccccccagggctgcagggagtgaaggggcatcctggcaaacgcggggctctg
ggagattctggccgccaggggaagccgggtcccaagggagatgtgggtgcctctggagag
caaggcatccctggaccaccgggtccccagggcatcaggggctacccgggcatggaggga
cccaaaggagagatgggtcctcatgggtacaaaggcatggtgggctccattggtgccgcc
gggtcaccaggtgaggaaggtccgcgggggccaccaggccaagcaggggagaagggcgat
gtgggcagcccaggtgttcgaggaccccagggaataacaggcccgaagggagcaaccggc
cccccaggcatcgatggcaaggacggggccccaggcatacctggcatgaagggcaacgca
ggacaggctgggcggccaggaaaccagggccaccagggcctagcgggtgtgccgggccag
cctgggacaaaaggagacccaggagacaagggtgaaccaggccagcagggcctccctgga
ttctctggtcctcctgggaaggagggagagccgggacctccaggagaaatcggaccccga
ggcatcgtagggcagaagggtgaccagggtgagagggggccggtggggcagccaggccct
caaggacggcagggccccaagggggatcagggcccccccggaattccagggccccaaggc
ttgccaggcatcaagggagacaagggctccccagggaagaccggcccccgcggcagcgtg
ggcgacccgggggtggccggcctccagggagagaaaggcgagaagggcgagtctggcgag
ccggggcccaaaggacagcaaggagtccgcggagaacccggctacccgggccccagcggg
gatgcgggcgccccgggggtgcagggctaccccgggctccccggccctcgaggactggct
ggagaccgaggcgtgcccggactgcccggaagacagggcgtggcgggccgagacgccagt
gaccagcacatcgtgaccgtgatgatgaagatgatgcaagagcaactggcagaggtcgct
gtgagtgccaagcgggaggccctgggtgcagtcgggatggtgggtcctccaggaccccct
gggcctcctgggtacccaggcaagcagggaccccacgggcaccctggccctcggggcgtt
cctggcatcgtgggcgccgtgggtcagattggcaacacagggcccaagggaaaacgtgga
gagaagggtgaccagggagagatgggacgcgggcaccccgggatgcctgggcccccgggg
atccccggactccctggccggcccggccaggcaatcaacggcaaggatggagctcgaggg
tccccaggggtcctgggagaagcaggccgaccaggcctgccaggccccgtggggctgcca
ggcttctgtgagcctgcggcctgccttggagcctcagcctacacctctgcacgcctcacg
gagcctggatccatcaaagggccatga
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