Neomonachus schauinslandi (Hawaiian monk seal): 110575574
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Entry
110575574 CDS
T08474
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110575574 (VPS52)
Membrane trafficking [BR:
nsu04131
]
Protein recycling
Others
EARP complex
110575574 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
110575574 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
ATG16
Dor1
COG6_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
110575574
NCBI-ProteinID:
XP_021540222
UniProt:
A0A2Y9GM73
LinkDB
All DBs
Position
8:116077982..116096226
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AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELMLRAGASDMEEEEGPLGGGPGLQEPLQLGELDISSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLIVPSA
LITAILEAPVTEPRFLEQLQELDAKAAAVREQEGRGTAACADVRGILDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGSAAHDLFHAVMG
RTLGMTLKHLESYLTDCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgcgaccatggcggccgctgcccgagagctgatgttgcgagccggggcc
tcagatatggaggaggaggagggcccgctggggggtggtcctggtcttcaggagccatta
caacttggagaattggacatctcctctgatgaattcatcctggatgaagtggatgttcac
attcaggcaaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtggatctc
cgtcactattcaaagcaggttgagctggagctacagcagattgagcagaaatccatccgg
gattatatccaagagagtgagaatatagcatctttgcacaaccagatcacagcctgtgat
gctgttcttgagcgcatggagcagatgttgggagcttttcagagtgacctcagttctatc
agctctgagatccggacactgcaggaacagtcaggagccatgaacattaggcttcgaaac
cgccaggcagttcggggaaaacttggggaacttgtcgatggtctgatagtgccctctgct
ctgatcacggcaattctggaggcgccagtgacagagcccaggttcctggagcagttgcag
gagctggacgccaaggcagctgcagtccgagagcaggaaggtagagggacagcagcctgc
gctgatgtcagaggcatactcgaccggctccgggtcaaggcggtgacgaagatccgagag
ttcattcttcagaaaatttattccttcagaaaaccaatgaccaactatcaaatcccccag
acggccctgctgaagtacaggttcttctatcagtttctgctgggcaatgaacgagcaaca
gcgaaggagatcagggatgagtatgtggaaacactgagcaagatctacctgtcgtactat
cgctcttacctggggcggctcatgaaggtgcagtacgaggaagttgctgagaaggatgat
ctaatgggtgtagaagatacagcaaagaaaggattcttctcgaagccttccctccgcagc
aggaacaccatcttcaccctggggacccgtggttctgtcatttcccccactgaactggag
gcccccatcctggtgccccacaccgcccagcggggagaacagaggtatccattcgaggcc
ctcttccgaagccagcactacgccctcctagacaattcctgccgtgaatatcttttcatc
tgtgaattcttcgttgtgtctggctcggctgcacacgacctcttccatgctgtcatgggt
cgcacactcggcatgaccctgaaacacctggagtcttatctcacggactgctacgatgcc
attgctgtttttctctgtatccacatcgtcctccggttccgcaacattgcagcgaagagg
gatgttcctgccctggacaggtactgggagcaggtgcttgccttgctgtggccacgattt
gagctgatcctggagatgaatgtccagagtgtccgaagcactgaccctcagcgccttggg
gggctggatactcggccccactatatcacacgccgatatgcagagttctcgtctgctctt
gtcagcatcaatcagacaattcccaacgaacggacaatgcagctgctgggacagctacag
gtggaagtagagaattttgtcctccgagtggcagccgagttctcctcaaggaaggagcag
cttgtgttcctgatcaacaactatgacatgatgctgggtgtgctgatggagcgggctgca
gatgacagcaaggaggttgagagtttccagcagctgctcaatgctcggacacaggaattc
attgaagagttattgtctcccccttttgggggtctggtggcatttgtgaaggaagctgag
gctttgattgagcgtggacaggctgagcgacttcgaggggaagaagcccgggttactcag
ctgatccgtggctttggtagttcctggaaatcatcagtggagtctctgagtcaggatgta
atgcggagtttcaccaacttcagaaatggaaccagtatcatccagggagctttgacccag
ctgatccagctctatcatcgcttccaccgggtgctctctcagccccagctccgagctctc
cctgcccgggctgagctcatcaacattcatcatctaatggtggagctcaagaaacacaag
cctaacttctga
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