Neomonachus schauinslandi (Hawaiian monk seal): 110575658
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Entry
110575658 CDS
T08474
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
KO
K08525
retinoid X receptor beta
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03320
PPAR signaling pathway
nsu04659
Th17 cell differentiation
nsu04919
Thyroid hormone signaling pathway
nsu04920
Adipocytokine signaling pathway
nsu04928
Parathyroid hormone synthesis, secretion and action
nsu05200
Pathways in cancer
nsu05202
Transcriptional misregulation in cancer
nsu05207
Chemical carcinogenesis - receptor activation
nsu05216
Thyroid cancer
nsu05222
Small cell lung cancer
nsu05223
Non-small cell lung cancer
nsu05226
Gastric cancer
nsu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
110575658 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
110575658 (RXRB)
03320 PPAR signaling pathway
110575658 (RXRB)
04919 Thyroid hormone signaling pathway
110575658 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
110575658 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110575658 (RXRB)
05202 Transcriptional misregulation in cancer
110575658 (RXRB)
05207 Chemical carcinogenesis - receptor activation
110575658 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
110575658 (RXRB)
05216 Thyroid cancer
110575658 (RXRB)
05222 Small cell lung cancer
110575658 (RXRB)
05223 Non-small cell lung cancer
110575658 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110575658 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110575658 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nsu03310
]
110575658 (RXRB)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
110575658 (RXRB)
Nuclear receptors [BR:
nsu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
110575658 (RXRB)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
110575658
NCBI-ProteinID:
XP_021540326
UniProt:
A0A2Y9GMA6
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Position
8:116131756..116138586
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AA seq
532 aa
AA seq
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MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAASSLGGSGAPPP
PPLPPPPPGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctcccccttctcctcct
gggctacccttacccccgtcagcagcctcatcccttggaggttccggggccccccccccc
ccccccctgccccccccccccccgggctcccctttcccggtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaaaggctttgtgccatctgcggggaccgaagctcaggcaaacactatggggtttacagc
tgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcaccgtggacaagcgccagcgcaaccgctgtcagtactgccgc
taccagaagtgcctggccaccggcatgaagagggaggcggtacaggaggagcgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccaaatgaccccgtgactaacatctgtcag
gcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgaccaggtcatattgctacgggcaggctggaatgagctcctcatt
gcttccttctcccaccgatccattgatgtccgagatggcatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattcggcaggcgtgggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgttcaatccagatgccaagggcctctccaaccctagtgaggtggag
gttctgcgggagaaagtgtacgcttcactggagacctattgcaagcagaagtaccctgag
cagcagggacggtttgccaagctgctgctacgtcttcctgccctcagatccatcggcctt
aagtgtctagagcatctgtttttcttcaagctcattggagacacccccattgacaccttc
ctcatggagatgcttgaggctccccaccagctggcctga
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