Neomonachus schauinslandi (Hawaiian monk seal): 110575872
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Entry
110575872 CDS
T08474
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
nsu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110575872 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110575872 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110575872 (PRPF19)
04121 Ubiquitin system [BR:
nsu04121
]
110575872 (PRPF19)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110575872 (PRPF19)
Enzymes [BR:
nsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110575872 (PRPF19)
Spliceosome [BR:
nsu03041
]
Complex B
Other components
Prp19 complex
110575872 (PRPF19)
Complex C
Prp19-CDC5 complex
110575872 (PRPF19)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
U-box type E3
110575872 (PRPF19)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
110575872 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
U-box
Beta-prop_Vps41
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
PROPPIN
Beta-prop_Nup120_160
eIF2A
Cytochrom_D1
RMC1_N
Beta-prop_WDR35_TULP_N
zf-Nse
Beta-prop_DCAF12
DUF1830
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
110575872
NCBI-ProteinID:
XP_021540567
UniProt:
A0A2Y9GN53
LinkDB
All DBs
Position
11:10506644..10517145
Genome browser
AA seq
504 aa
AA seq
DB search
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVAGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPADTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgatctgctcgatctccaatgaagtgccagagcacccgtgcgtgtcccctgtc
tctaatcatgtttacgagcggcggctcattgagaagtatattgcagagaatggcacagac
cccatcaacaaccagcctctgtccgaggagcagctcattgacatcaaagttgctcaccca
atccgacccaagcctccctctgctaccagcatcccagccattctgaaagccttgcaggat
gagtgggatgcagtcatgctgcacagcttcactctgcgccagcagctgcagacgacccgc
caagagctgtcccacgctctgtaccagcacgatgccgcctgccgtgtcattgcccgtctc
accaaggaagttacagctgcccgagaagctctggccaccctgaaaccacaggctggtctc
atcgtgccgcaggccgtgccgagctcacagccgagtgttgcgggtgcaggcgagccgatg
gatttgggtgagctggtgggaatgacccccgagattatccagaagcttcaagacaaggcc
actgtgctcaccacggagcgtaagaagagagggaagacggtgccggaggagctggtgaag
ccggaggagctgagcaaataccggcaggtggcatcccacgtgggtttgcacagtgccagc
attcctgggatccttgccctggacctctgtcctgccgacaccaacaagattcttactggt
ggggcagataaaaatgttgtcgtcttcgacaagagttctgagcaaatcctggccaccctc
aaaggccataccaagaaagtcaccagtgtggtgtttcatccttcccaggagctggtgttt
tctgcctctccagatgctactatcaggatttggtcagtcccgaatgcctcctgtgtgcag
gttgttcgggcccatgaaagcgctgtgacaggcctcagcctgcatgccactggggactac
ctcctgagctcctctgatgaccagtactgggccttctctgacatccagacagggcgtgtg
ctcaccaaggtgacagatgagacctctggctgctctctcacctgtgcgcagttccaccct
gatgggctcatttttgggacaggcaccatggactcgcagatcaagatctgggacttgaag
gagcgcaccaacgtggccaacttccctggccactcgggccccattactagcattgccttc
tcggagaatggctactacctggctacggcggccgatgactcctctgtcaagctctgggat
ctgcgcaagcttaaaaacttcaagacgctgcagctggataacaactttgaggtgaagtca
ctgatctttgaccagagcggtacctacctggccctcgggggcactgatgtccagatctac
atctgcaagcagtggacagagattcttcatttcacagagcatagcggcctgaccacaggg
gtggcctttgggcaccacgccaagttcatcgcttcaacgggcatggacaggagcctcaag
ttctacagtctgtag
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integrated database retrieval system
