Neomonachus schauinslandi (Hawaiian monk seal): 110576249
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Entry
110576249 CDS
T08474
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
nsu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110576249
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110576249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110576249
03041 Spliceosome [BR:
nsu03041
]
110576249
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110576249
mRNA cycle factors
Common to processing body (P body) and stress granule
110576249
Spliceosome [BR:
nsu03041
]
Common components
Common spliceosomal components
hnRNP proteins
110576249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110576249
NCBI-ProteinID:
XP_021540998
UniProt:
A0A2Y9GT09
LinkDB
All DBs
Position
11:complement(39151848..39153382)
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AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGGYG
GGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcccaaagagcctgaacagctgcggaagctcttcatcggaggt
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcaatggggaacactt
acggactgtgtggtaatgagagatccaaacaccaagcgctccagaggctttggctttgtc
acgtatgccactgtggaggaggtggatgcagccatgaacgcaagaccacacaaggtggat
gggagagttgtggaaccaaagagggctgtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaagaagacactgaagaacatcat
ctaagagattattttgaacagtatgggaaaattgaagtgatcgagatcatgactgaccgg
ggcagtggcaaaaagagaggttttgcttttgtaacatttgatgaccatgactctgtagac
aagattgtcattcaaaaataccatactgtgaatggccacaactgtgaagtaaggaaagcc
ctatctaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcgtggaggg
aacttcagtggtcgaggtggctttggtggcagtcgaggtggtggtggatatggtggcagt
ggggatggctataacggatttggtaatgatggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggaggaggcggaggcggctatggc
ggtggtagtggaagcaactttggaggtggcggaagctataatgattttggcaattacaac
aatcaatcctcaaattttggacccatgaaaggaggaaattttggaggcagaagctctggc
ccctatggtggtggaggccaatactttgccaaaccacgaaaccaaggtggctatggtggt
tccagcagcagcagtagctatggcagtggcagaaggttttaa
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