Neomonachus schauinslandi (Hawaiian monk seal): 110576261
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Entry
110576261 CDS
T08474
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110576261 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110576261 (CSTF3)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110576261 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
110576261
NCBI-ProteinID:
XP_021541018
UniProt:
A0A2Y9GP12
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Position
11:26599273..26669161
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AA seq
717 aa
AA seq
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MSGDGAPEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDDDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggcgccccggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactatacattgaagcagagataaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgttcgagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcatatgactttgcactagataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgttggatcttacgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtcgagattacatgaatgctaggcgtgtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcagtgcctcctcag
aatactccccaggaagcccagcaggtggatatgtggaagaaatacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagacgcttatcacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtactgggccatcaccctgatatttggtatgaagctgcccagtat
cttgaacagtcaagtaaactgcttgcggaaaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaaatatgagaaagttcac
agtatatataacagacttctggcaattgaggatattgaccccaccttggtatatatccaa
tatatgaaatttgcaagaagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggagtat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctgggtctaaagaaatat
ggagacattccagaatatgtcttagcctatattgactatctttctcacctcaatgaggac
aataatacccgagttttgtttgaacgagtcttaacctctggaagccttcctcctgagaag
tctggagaaatctgggcccgatttctagctttcgaaagtaacattggtgatctagctagc
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtggacagatataagttcatggacttatatccttgctcggcaagtgaa
ctaaaagcgcttggttataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttccatagtgcctgttctgaaagatgaagtggatagaaaaccagag
taccccaaaccagacactcagcagatgattccatttcagccacgacatttagcaccgccc
ggcttacaccctgttcccgggggtgtgttcccagtgccgcctgcagccgtcgttctaatg
aaacttctccctcctcccatctgcttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgttcggatcatcacg
ggcggcgccccggagctggccgtcgaggggaacggcccggtggagagcaacgccgtactc
accaaggcggtcaagaggcccaacgaggattccgatgacgatgaagaaaagggagctgtc
gtcccccctgttcatgacatctacagagcgcggcagcagaagcgaattcggtga
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