Neomonachus schauinslandi (Hawaiian monk seal): 110576356
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Entry
110576356 CDS
T08474
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04120
Ubiquitin mediated proteolysis
nsu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110576356 (SYVN1)
04120 Ubiquitin mediated proteolysis
110576356 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsu04121
]
110576356 (SYVN1)
Enzymes [BR:
nsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110576356 (SYVN1)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110576356 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
U-box_ZFPL1
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110576356
NCBI-ProteinID:
XP_021541210
UniProt:
A0A2Y9GTM4
LinkDB
All DBs
Position
11:7304612..7310864
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AA seq
612 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGA
ASAAASAASASAPGPGSAPAPEAGPTPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLT
PEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVSPTEE
TAPAVVPAAPPTSIPSSETTTPSPGVYPPAPEPEKPPAPESVGTEELPEDGEPDAAELRR
RRLQKLESPVAH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagttgagggcagcagagatggagcaccttctggaacgt
tcctggtacgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgcactcttcactctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctcaccatcttcatcaagtatgtcctgcactctgtggacctccag
agcgagaacccctgggacaataaggccgtgtacatgctctacacggagctgtttacaggc
ttcatcaaggttttgctctacatggccttcatgactatcatgatcaaggtgcacaccttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaggctgtgacg
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtatccagatgccacc
ccagaggaactccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagaggctgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccctacctgccgtatggacgtcctccgggcatcactgccgacc
cagtcaccaccgcccccagaacctgcggatcaagggccaccgccagccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctatggccccccatgggccccttcccacctgtcccacctccccccagctca
ggagaggctgtggcccctccatccactagtgcagcagccctttctcggcccagtggagcg
gccagcgctgctgcttctgcagcctctgcctcggcccccggccctggctccgccccggcc
cctgaggcgggccccaccccgggcttccccttcccgcccccctggatgggcatgccgctg
cctccaccttttgccttccccccaatgcccgtgccccctgcgggctttgccgggctgacc
ccggaggagctgcgggctctggaaggccacgagcgacagcacctggaggctcggctgcag
agcctgcgcaacatccacacgctgctggacgccgccatgctgcagatcaaccagtacctc
accgtgctcgcctccttggggcccccccggcctgccacctcagtcagccccactgaggag
actgcccctgcagttgtccctgctgccccccccaccagcatccccagctctgagaccacc
accccatccccaggagtctacccaccagcccctgagcctgaaaagcctccagctcctgag
tcagttggcacggaggagctgcctgaggatggggagcccgatgcagcagagctccgtcgc
cgccgcctgcaaaagttggagtcccccgtcgcccactga
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