Neomonachus schauinslandi (Hawaiian monk seal): 110576931
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Entry
110576931 CDS
T08474
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03013
Nucleocytoplasmic transport
nsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110576931 (UPF3B)
03015 mRNA surveillance pathway
110576931 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110576931 (UPF3B)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110576931 (UPF3B)
mRNA cycle factors
P-body specific factors
110576931 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
110576931
NCBI-ProteinID:
XP_021541862
UniProt:
A0A2Y9GRN5
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All DBs
Position
X:29936581..29952611
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AA seq
483 aa
AA seq
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MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEESGRDYRERERDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEAVRDKGKKTESTESVGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactcccccg
ggggccacaggcagcggcggtggggcttcgggggacagcaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccggagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaaggaaaagacaaagagaagaagagaggaggaaatggaaagaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaaaaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggcgaacctaaagatgaaaagcctaagaggcctgaagaggag
agtggcagagactacagggagcgggagcgggactatgagcgagaccaagagcgcatcctg
cgggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggagcgctac
gagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaagcggtt
cgggataaaggaaagaagactgaaagtacagaatcagtaggcagctcagaaaaaactgaa
aagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccgcctgatgacagcaccaag
tctggagattcagcaatagaaaaaaagcaggaaagtggtattagccatagaaaagaagga
ggagaggagtga
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