Neomonachus schauinslandi (Hawaiian monk seal): 110577372
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Entry
110577372 CDS
T08474
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03013
Nucleocytoplasmic transport
nsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110577372 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
110577372 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110577372 (THOC2)
03041 Spliceosome [BR:
nsu03041
]
110577372 (THOC2)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110577372 (THOC2)
Spliceosome [BR:
nsu03041
]
Complex C
Other components
EJC/TREX
110577372 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110577372 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110577372
NCBI-ProteinID:
XP_021542341
UniProt:
A0A2Y9GSV7
LinkDB
All DBs
Position
X:26866178..26981986
Genome browser
AA seq
1601 aa
AA seq
DB search
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNGNSSS
NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARILGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTVANVESKSTQEKEREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLIGVFNQCNGKL
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggattctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaggctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagcgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttatcaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgacttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtacttctacagtttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtggaagctaagcaaattgttagaaaacttacgatggttgtattgtcttct
gaaaaaattgatgaacgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcgcagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgcaatttgcaagctcattcacataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggttcacctgttaatgctttgcaaaataagagggcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttcgcatgatcccattttatttgcaaaagtggtgcgcataggcaaatcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtacttcttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcgcaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgttttggcctattgtatcattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacgatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcctcccagagattaaaggatgcgctgttggatcatgatcttgctctt
cctctctgtttgcttatggctcagcagaggaatggggtaatcttccaagaaggtggagag
aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctctgtaacgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcacaccatatttcgtctaaatatgatgaacttaaaaaatcagaaaagggaagt
aaacagcagcataaagttcacaagtacattacatcatgtgaaatggtgatggctcctgtc
catgaagcagtggtctccttacacgtttccaaagtctgggatgacatcagccctcagttc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaagagcgttgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacacgtacagcgagttctacagagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagctagtcggtatggg
agatttctttgctgcatgttagagactgtgaccaggtggcacagtgacagagccacgtat
gaaaaggaatgtggaaattatccaggattccttactatattacgggccactggatttgat
ggtggaaataaagctgaccaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatccgtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatttg
ggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcttcatcgtcgataggaagtgcgtctaagtcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccacaccgaaagggaattcaagcaatggaaacagtagctct
aacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccaggatacttggtaaagatggtaaa
gaaaaaccgaaggaagagcggccaaataaagatgaaaaagcaagagagacgaaggaaaga
acacccaagtcagacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaattcaaaaccactgttgccaacgtagaatcaaaatcgactcaagaaaaggaaagagag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatgtt
gcagagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagacttg
gacaagtcgagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcattcaaacaatgaccgtgaagtgccgccggacttagccaagaggcga
aaagaggaaaatggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggcggcgattcttttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacaatatccttttcatcttattggagtttttaatcagtgtaatggaaag
ctttga
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