Neomonachus schauinslandi (Hawaiian monk seal): 110577496
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Entry
110577496 CDS
T08474
Symbol
TNRC6A
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110577496 (TNRC6A)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110577496 (TNRC6A)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110577496 (TNRC6A)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110577496 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110577496
NCBI-ProteinID:
XP_044771578
UniProt:
A0A8M1MG66
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All DBs
Position
5:155863476..155964264
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AA seq
1959 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNPQQPQPPQPPQPPQPPQPPQPQPPPQQP
PQPAQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQ
PQNNGEVQNSKNQSDINHNTSGSHYENSQRGPVSSPSDSSTNCKNAVVNDSPEKEAWPSV
PGSDPELASECMDADSASSSESERNITIMASGSTGGEKDGLRNSTGLGSQNKFVVGSSSN
NVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLN
SASNHGAWPVLDNNGLALKGPVGSSSSGINIQCSTLGQMPNNQSINSKVGGSSTHGTWGS
LQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPGSTGAW
RVSTMNHPQIQAPSVMNGTSLSHLSNGEPKSGGSYGTTWGAYGSNYSGDKCSSPNGQANG
DTVNATLMQPGINGPMGTNFQVNTNKGGGVWESGAANSQSASWGSGNGANSGGSRRGWGT
PAQNTGTNIPSVEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSAASQTNEQNSVW
AKTGGTVESEGSTESTGRLEEKATGENQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGW
GQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPTSNDTSSVSGW
GDPKPALRWGDSKGSSCQGGWEDDSAATGMVKSNQWGNSKEEKSAWNDSQKSKQGWGDGQ
KSNQGWSVSAGDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNIN
PNNSSGWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVGSPDWNKQQDIVGSWGIPPATG
KPPGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWN
KNVPNGSSRSDQQAQVHQLLPSASAISNKEAGSGSGWGEPWGEPSTPATTVDNGTSAWGK
PIDSGPSWGEPIATASNTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEE
EEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGTMKGGNKQEEAWINP
FVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRP
QISKESSMERSPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNL
NSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYA
PNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQ
GRPLSVQQQMMQQSRQLDPSLLVKQQTPPSQQQPLHQPAMKSFLENVMPHTTPELQKGPS
PINAFSSFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSG
FRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPN
IDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNV
PLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPP
LSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQ
HGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQS
QSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTHCGDLHGTSLWGTPH
YSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatccgcagcagccacagccgcctcag
ccgcctcagccgcctcagccgccgcagccgccgcagcctcagccgccgccgcagcagccg
ccgcagccagctcaggccttgcctcggtaccctcgagaagtgccaccgcgatttcgccac
caggaacacaaacagcttctaaagcggggtcagcattttcctgtcatagcagcaaacctg
ggatctgctgttaaagtgttaagcagccagtcagaaagcagtgctttaacaaatcaacag
ccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatataaaccacaacact
tcaggatcccattatgaaaattcgcagcggggacctgtgtcttctccgagtgactctagc
acaaattgtaagaatgctgttgtaaacgactcccccgaaaaagaagcatggccctcagtc
cctggcagtgatccagagttggcttcagaatgtatggatgctgattctgcctccagttct
gaatcagagagaaacatcactatcatggcttcaggaagcaccggtggtgaaaaagatggc
cttcggaatagcactggacttggttcccaaaacaagtttgtggttggtagcagcagcaat
aatgtgggccatggaagtagtactgggccatggggtttttcccatggagccataataagc
acatgtcaggtctctgtggatgctcctgaaagcaaatcagaaagtagcaacaatagaatg
aatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttgaat
tcagctagcaaccatggtgcctggccagtattagacaacaacggacttgccctcaaaggg
cctgtagggagcagtagttctggcatcaatattcagtgcagtaccttaggccagatgcct
aacaatcagagtattaactctaaagtgggtggttcttccacccatggtacctggggaagc
cttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagtggtcaa
cctcagaatattaccactgagatgactggaccaaataacactactaactttatgacctct
agtttaccaaactccggttcagtacagaataatgaactgcctggtagtacaggggcctgg
cgtgtgagcacaatgaatcatcctcagatacaggctccgtcggttatgaatggcacttcc
ctttctcaccttagcaatggagagccaaaaagcggaggctcttacggtactacgtggggt
gcctatggttctaactactctggagacaaatgttcgagccctaacggccaagctaatggt
gacactgtgaatgcaactctaatgcagcctggcataaatgggcctatgggcactaacttt
caagtgaacacaaataaaggaggaggcgtgtgggagtctggggcagcgaattcccagagt
gcatcgtggggaagtggaaatggcgcaaattctggaggaagtcgacgaggatggggaact
cctgcacaaaacactggcactaatatacccagcgtggagtggaacaaactgcctagcaat
cagcattccaatgacagtgcaaatggcaatggtaagaagtttacaaacggatggaagtct
actgaggaagaggatcaaggttctgccgcatctcagacaaatgagcagaacagtgtatgg
gccaaaacaggaggtacagtggagagtgaaggtagtacagaaagcactggacgcctcgag
gagaaagcaactggggaaaatcagagtagagataggagaaaaattgatcagcacacatta
ctccaaagcatcgtaaacagaactgacttggatccacgtgtcctctccaactctggttgg
ggacagactcctattaagcagaatactgcctgggatacggaaacatcacctagaggggaa
agaaagactgacaatgggacagaggcctggggaagctctgcaacacagacttttaactca
ggggcatgtatagataagactagccctactagtaatgatacctcatctgtatcggggtgg
ggagatcccaaacctgctctgaggtggggagattccaaaggctcaagctgccagggggga
tgggaagatgactctgctgctacaggaatggtcaagagcaatcagtgggggaacagcaaa
gaagagaagtccgcatggaatgattcgcaaaagagcaaacagggatggggtgatggacaa
aaatcaaaccaagggtggtccgtttctgccggtgataactggggggaaacttcaaggagt
aaccattggggtgaggctaataagaaatctagctcaggaggtagtgacagtgaccggtcc
gtttctggttggaacgaacttggtaaaactagttcctttacttggggaaataacataaat
ccaaataattcatcaggatgggatgaatcttctaaacctaatccttcccagggatgggga
gatcctccaaagtctaatcagtctctaggttggggagattcgtcaaagccagtcggttct
ccagactggaacaagcaacaagacattgtcgggtcttggggaatcccaccagctacaggc
aaacctcctggtacaggctggctgggaggacctataccagccccaacaaaagaagaagag
cccacaggctgggaggaaccatccccagaatccatacgtcgcaaaatggagattgacgac
ggaacttcagcttggggagatccgagcaaatacaactacaaaaatgtgaacatgtggaac
aaaaacgtcccaaatggcagcagccgttcagaccagcaagcacaggtacaccagttgcta
ccatctgcaagtgccatctcaaacaaagaggcaggcagtggctctggctggggtgagccc
tggggggagccttctactccagccacaactgtggataatggtacttcagcatggggtaaa
cccatagacagtggtcccagctggggggagcccattgctacggcatccaacacatccacg
tggggctccagctctgttggtcctcaagcattaagcaaatctgggccaaaatctatgcaa
gatggctggtgtggtgatgatatgccattgcctggaaatcgccccactggctgggaagag
gaagaggatgtagagattggaatgtggaatagtaattcatctcaagagcttaactcatct
ttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagtggcaaaaaaagg
agaagggaaaggggaaccatgaaaggtggaaacaaacaagaagaagcatggataaatcca
ttcgttaaacagttttcaaatatcagtttttcgagagactcaccagaagaaaatgtacag
agcaataagatggatctttccggaggaatgttacaggacaaacgaatggagatagataaa
catagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggttctcggcct
cagatttccaaagagtcttccatggagcgcagcccttactttgataaggatggcattgta
gcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagcttcccccttca
aatagtgcactacctaaccaggcccttggctccatagcagggctgggtatgcaaaacttg
aattctgttagacagaatggcaatcccagtatgtttggtgttggaaacacagcagcacaa
ccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcctaatctccgt
gctcaagtgcctcctccattactctcccctcaggttccagtttcattgctgaagtatgca
ccaaacaacggtggcctgaatccgctctttggccctcaacaggtagccatgctgaaccag
ctatcccaactaaaccagctttctcagatctcccagttacagcgattgttagcgcagcag
caaagggcccagagtcagagaagcgtgccttctgggaaccggcagcagcaagaccagcag
ggtcgacctcttagcgtgcaacagcagatgatgcagcagtcccggcaactcgatcccagc
ctgttggtgaagcagcagaccccgccatctcagcagcagccactccatcagccagccatg
aaatcttttctcgagaacgtcatgccccacactacacccgagctgcaaaaagggccatca
ccaataaacgctttcagcagcttcccaataggcttgaactctaacttgaatgtaaatatg
gatatgaacagtattaaagagccacagtcaagactaaggaagtggactacagtggacagc
atttctgtgaacacatctttggatcaaaactccagcaaacatggtgctatttcaagtggt
ttcaggctggaagagtctccatttgttccctatgactttatgaacagcagtacttctcca
gccagccctccgggttcaataggagatggctggccacgtgccaaatcgcctaacggctct
agcagtgttaactggccaccagaatttcgccctggtgaaccatggaaaggttatccaaac
attgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttcaatt
aatactgtgcgggaagtggaccacctcagggacaggaacagtgggtcatcctcatccttg
aacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaacgtt
cccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaattgacatgg
tctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtccctttacca
cctaaaaacatcactgctccgtcccgcccacctccgggactgactggtcagaagccaccc
ttgtctacgtgggataactctccccttcgtgtaggtggaggatgggggaattctgacgcc
aggtacaccccaggttccagctggggtgagagcagctcagggagaataacaaattggctt
gttctaaagaaccttacacctcagatcgatggctcaactctgcgtactctgtgcatgcag
catggcccactgataacattccacctgaacctcccacatggaaatgctttggtccgttac
agttccaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgtattggggaac
actactattcttgctgagtttgccagtgaagaggagatcagccgtttctttgcacaaagt
cagtctctgaccccttctcccggctggcagtctctcgggtccagccagagccggctgggc
tccctcgactgttcccactcgttctccagccggaccgatctcaatcactggaatggtgct
gggctgtcgggaactcactgtggagaccttcacggcacttcactctgggggaccccacat
tattccacaagcctgtggggtcctcccagcagcagcgaccccaggggaattagcagccca
tcccccattaacgcttttctttctgttgaccacctgggtgggggtggagagtccatgtaa
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