Neomonachus schauinslandi (Hawaiian monk seal): 110578919
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Entry
110578919 CDS
T08474
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110578919
03009 Ribosome biogenesis [BR:
nsu03009
]
110578919
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110578919
Spliceosome [BR:
nsu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110578919
Ribosome biogenesis [BR:
nsu03009
]
Eukaryotic type
90S particles
Helicases
110578919
Pre-60S particles
110578919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
110578919
NCBI-ProteinID:
XP_021544112
UniProt:
A0A2Y9GY08
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All DBs
Position
4:complement(124035781..124038008)
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AA seq
671 aa
AA seq
DB search
MSHLPMKLLRKKIEKWNLKLRQXNLKLQEASDVSLSETQNGDVSEETVGCGKVKKSLKQS
VNVGSSEAQNGEIAKETVETIQVKKKKKKSTIIINGEAATQPPNSESKKKKKKKRKMVDD
AGPDTKKVKTEDKGDSEEGAQAPEETENSVEKPDDQEEDSEMPSLPLGLTGAFEDTSFAS
LSNLVNENTLTAIKEMGFTNMTEIQHKSIRPLLEGRDLLVATKTGSGKTLAFLIPAVELI
VKLKFMPRNGPGVLILSPTRELAMQTFSVLKELMTHHVHTYGLIMGGSSRSAEAQKLGNG
INIIXATPGHLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQLIKLLPRRRQTM
LFSATQTQKVEDMARISLKKEPLYVGVDDDKANATVDDLEQGYVVCPSEKRFLLLFTFLN
XKLMVFLSSCKSVKYHQNNQNHYELLNYIDLPVLAIRGRQKQSKRTTTFFQFCNADSGIL
LCTDMAARGLDIPEVDWIVQYDPPDNPKEYIHRVGRTARGLNGRGHALLILRPEELDFVH
YLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSYSLKQIF
NVNNLNLPQLALLFGFKVHPFVDLNVNSNGGKLKKRGGSSGFGYQEAKKVKKSKIFKHIS
KKSSDSQQFSH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatctacccatgaaactcctgcgtaagaaaatcgagaaatggaacctcaaattg
cgccagtgaaacttaaagcttcaggaggcctcggatgtgagtttatcggaaacccaaaac
ggagatgtgtctgaagaaacagtgggctgtgggaaggttaaaaaatccctaaaacagtct
gtgaatgtgggctcgtcagaagcccagaatggagagatagctaaagaaacagtggaaact
atacaagttaaaaaaaaaaagaagaaatctaccataataatcaatggagaagcagcaaca
cagcctcccaattcagaatccaaaaaaaagaagaagaaaaagagaaaaatggtggatgat
gctgggcctgataccaaaaaagtgaaaactgaagacaaaggggactctgaagaaggggcc
caagctcctgaagagacagaaaacagtgtggagaagccagatgatcaggaagaggacagt
gaaatgcccagcctacccctgggactgacaggagcttttgaggatacttcatttgcttct
cttagtaatcttgtcaatgagaacactctgacagcaataaaagaaatgggttttacaaac
atgactgaaattcagcataaaagtatcagaccacttctagaaggcagggatcttctagtg
gccacaaaaacaggcagtggcaaaacgctggcatttctcatccctgcagtcgaactcatt
gtcaagttaaagttcatgcctaggaatggacctggagttcttatcctctcacctactagg
gaactggccatgcagactttcagtgttcttaaggagctgatgacgcaccatgtccacaca
tacgggttgataatgggcggcagcagcagatctgctgaagcacagaaactcggtaatggg
atcaacatcatcngtgccaccccaggccacctcctggaccacatgcagaataccccaggg
tttatgtataaaaatctgcagtgtctggttattgatgaggctgatcgtatcttggatgtt
gggtttgaagaggaattaaaacagcttattaaacttctgccaagacgcaggcaaaccatg
ctcttttctgccacacaaactcaaaaagttgaagacatggcaaggatttcgttgaaaaag
gagccattgtatgttggtgttgatgatgataaagctaatgcaacagtggatgaccttgag
cagggatatgttgtttgtccctcagaaaagagattcctcctgctctttacgttccttaat
nngaaactgatggtcttcctttcatcctgtaagtccgtgaaataccatcaaaacaaccaa
aaccattatgagttgctgaactacatcgatttgcctgtcttggccattcgtggaaggcag
aagcaaagtaagcgcacaaccacattcttccagttctgcaacgcagattcagggatattg
ttgtgtaccgacatggcagctagagggctggatattcctgaagtggactggattgttcag
tatgaccctccagataaccccaaggaatatattcatcgtgtgggaagaacagccagaggc
ctaaacgggagagggcatgccttgctcattttacgccctgaagaattggatttcgttcat
tacttgaagcaatccaaggttccattaagtgaatttgagttttcctggtccaaaatttct
gacattcagtctcagcttgaaaaattgattgaaaagaactacttccttcataagtcagcc
caggaagcatataagtcctacattcgagcatatgattcctattctctgaaacagatcttc
aatgttaataacttaaatttgccacagcttgctctgttgtttggtttcaaggtgcatcct
tttgttgatctgaacgtgaacagcaatggcggcaagcttaaaaagagaggaggcagcagt
ggcttcggctaccaggaagccaagaaagtcaagaagtccaaaatcttcaaacacattagc
aagaagtcgtctgacagccaacagttctcccactga
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