Neomonachus schauinslandi (Hawaiian monk seal): 110579025
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Entry
110579025 CDS
T08474
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04140
Autophagy - animal
nsu04211
Longevity regulating pathway
nsu05010
Alzheimer disease
nsu05014
Amyotrophic lateral sclerosis
nsu05016
Huntington disease
nsu05017
Spinocerebellar ataxia
nsu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110579025 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
110579025 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110579025 (RB1CC1)
05014 Amyotrophic lateral sclerosis
110579025 (RB1CC1)
05016 Huntington disease
110579025 (RB1CC1)
05017 Spinocerebellar ataxia
110579025 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
110579025 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsu01009
]
110579025 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110579025 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
nsu03029
]
110579025 (RB1CC1)
Protein phosphatases and associated proteins [BR:
nsu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110579025 (RB1CC1)
Membrane trafficking [BR:
nsu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110579025 (RB1CC1)
Mitochondrial biogenesis [BR:
nsu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110579025 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
110579025
NCBI-ProteinID:
XP_021544249
UniProt:
A0A2Y9H2P6
LinkDB
All DBs
Position
4:complement(111199592..111293967)
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTEL
VLSPDMPRTTNHSLLTSFHKSVEHIAPDATDAENGKEIRESCQSTVQQDETSVDAKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCIAVVEVVRRKMFIKHYREWVGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPLLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPPSASSPRIESATG
IATTTSPRTPPSLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
VCGKEDLGDHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
LEIRNIIEKVKHSLEITLNEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLED
LKKLHVENDEKMQLLRTELHCLEQSHLKELEDALHVRHTQEFEKVMTDHKVSLEKLKKEN
QQRIDQIQEFHATVIQEKEQQLQELKLKFSDLSDMRCKLEVELALKEAETDEIKLLLEES
RAQQKETLKSLLEQETENLRVEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESDMLKAELNKVMSLHHQAFEIERKLKGEIAELQSKLDAELSALEKQKDEKLTQQ
EEKYEAIIQKLEKDKEKLVMSQEQDREQLIQKLNCEKEEAIQTALTEFKLEREAVEKELL
EKVKHLENQIAKSLATESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETS
MMSVQENSHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaactaccctgacatttgacactgaactt
acagtgcaaactgtggcagacctcaagcatgccattcatagcaaatacaagattgctatt
cagcatcaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgatcgtccacctgctattccaaaaactactttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggccaatttggaggactgt
tcaaattcttaccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttacctgaacatgaaggctcagaaaaggctgaaatgaaaacctccactgaactg
gtgctctctcctgatatgcctagaacaactaaccattccttattaacctcatttcacaag
tcagtggaacatatagccccagatgccacagatgctgaaaatggaaaagaaattagggaa
tcttgccaaagtactgtccagcaggatgaaacttcagtagatgctaaagacggtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatcgttggtcaggaaatgctttgattccatgagcagacttgatccaaggattattcga
ccatttatagcagaatgccgtcaaactattgccaaacttgataatcagaacatgaaagcc
attaaaggacttgaagaccggctctatgccctggaccagatgatcgctagctgcagccga
ctggtgaatgaacagaaggaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtattacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcagaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caggaactagcaaataacctacatgtcagactgaagtggtgttgctttgtaatgcttcat
gctgatcaagatggagagaaattgcaagctttgctccgcctcgtaatagaactgttagag
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcatagctgttgtt
gaggttgtaaggagaaaaatgttcataaaacactacagggagtgggttggtgctttagtc
aaagatggaaagcgattatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttagaaagtcctttttaagaaatcgtctgtttaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttcttcagtcattttgtccttcagaagttcagccactcctcagggtcccctta
ctttgtgattttgaacctctacaccagcatgtacttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaaggca
tccatgagtcagacttcgccaccgtcggcttcctcaccacggatagaaagtgcaacagga
attgcaactactacctcaccgagaactcctccttcactcactgttcaggatcccttatgt
cctgcagtatgtcccttagaagagttatctccagatagcatcgatgcacatacatttgat
tttgaaactatcccccatccaaacatagaacagactattcaccaagtttcattagacttg
gattcattagcagaaagtcctgaatcagattttatgtctgctgtaaatgagtttgtaata
gaagaaaatttgtcatctcctaatcctataagtgatccacagagtccagaaatgatggtg
gaatcactttattcatctgttatcaatgcaatagacagtagacggatgcaggatacaaat
gtatgcggtaaagaggatttaggagatcatgcttctctgaatgtccaattggaaaaatgt
cgagttgttgcccaagactcgcacttcagcatacaaaccatcaaggaagacctttgccac
ttcagaacatttgtacagaaagaacagtgtgacttctcaaattctttaaaatgtacagca
ttagaaataagaaacattattgaaaaagtaaaacattctctggaaataacactaaatgag
aaacatcaaaaagaactgcagtctttaaaaagtgaatatgaaggcaaacttgatgcacta
ataaaggaaagtgaagaaaatgaaaacaaaattaaaaagctgaaaggagacttggtatgc
cttgaggaggttttacaaaataaagataatgaatttgctttggttaaacatgaaaaagaa
gctgtcatctgcttacaaaatgaaaaggatcagaagttgttagaaatggaaaatataatg
cacactcaaaattgtgaaattaatgaactgaaacaatcacgagagatagtgttagaagac
ttaaagaagctccatgttgaaaatgatgagaagatgcagttgctgcggacagaacttcat
tgcttagagcaaagtcatctaaaggagctagaggatgctctgcatgtcaggcacacacag
gagtttgagaaagttatgacagaccataaagtgtctttggagaaactaaaaaaggaaaat
caacaacgaatcgatcagatacaagagtttcatgccacagttatccaggaaaaagaacaa
cagctacaggaattaaaactcaagttttcagatttgtcagacatgagatgtaagttagag
gttgaacttgcattgaaggaagcagaaactgatgaaataaaacttttgctggaagaaagc
agagcccagcagaaggaaaccttaaaatctctccttgaacaagagacagaaaatttgaga
gtagagataagtaaactaaaccaaaagattcaggataataatgaaaactatcaggtgggc
ttggcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agtagacatgaagaagaatctgatatgcttaaagctgaattaaacaaagtaatgtcattg
catcaccaagcatttgaaatagaaagaaagctgaaaggagaaatagctgaactgcagagt
aaattggatgcagaattgagtgctcttgaaaaacaaaaagatgaaaaactcacccaacag
gaagagaagtacgaagctattatccagaaacttgagaaagacaaagagaaacttgtcatg
agccaggaacaagacagagaacagttaattcagaagcttaattgtgaaaaagaggaagct
attcagactgccctaacagagtttaaattggagagagaagctgttgagaaagagttacta
gaaaaagttaaacatcttgagaatcaaatagcaaaaagtcttgccactgaatctaccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagcttcaggaagaaaaggcaaag
tttctagaacaacttgaagagcaagagaaaagaaagaatgaagaaatgcaaaatgttcga
acatctctgattgctgaacaacagaccaattttaacactgttttaacaagagagaaaatg
agaaaagaaaatataatcaatgatcttagcgataagttgaaaagtacaatgcaacagcaa
gagcgagataaagatttgatagagtcactatctgaagatcgagctcgtttgcttgaggaa
aagaaaaaacttgaagaagaagtcagtaagttgcgtagtagcagttttgttccttcagcg
tatgtagctgcagccccagaactttatggagcttgtgcacctgaactcccaggtgaaaca
gagagatcagccatggaaacacaagatgaaggaaaagtggattcagcaatggagacaagc
atgatgtctgtacaagaaaatagtcatatgctatctgaagaaaaacagagaataatgctg
ttagaacgaacattacagttgaaagaagaagaaaacaagcggttaaatcaaagactgatg
tctcagagcatgtcttcggtatcctcaaggcattctgaaaagatagctattagagatttt
caggtgggagatttggtactcatcatcctagatgagcgccatgacaattacgtgttattt
actgttagtccaaccttgtattttctgcattcggagtctctgcctgccctggatctcaaa
ccaggtgagggtgcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggaa
aaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaag
ttttacagagtgaaagctgtgtcgtggaataagaaagtataa
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integrated database retrieval system
