Neomonachus schauinslandi (Hawaiian monk seal): 110579029
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Entry
110579029 CDS
T08474
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110579029 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110579029 (SOX17)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110579029 (SOX17)
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
110579029
NCBI-ProteinID:
XP_021544255
UniProt:
A0A2Y9H2Q0
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Position
4:112847814..112850027
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AA seq
406 aa
AA seq
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MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPAATLGPEGGRVAMDGLG
LPFPEQGFPTGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYPQASDYAGPPEPPVGPMHSRLSLEQAGPAIPGHVAPSSALQLYYNAI
SSPAAGGGRGFSMPPQQHPPGPGQPSPPPEALPCRDGADPNQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagacccgcagcgcgctg
cccgcggtgatggccgggctgggcccttgcccctgggccgagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggcggcggcgagcagcggggcgccggcgggggcggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggctaag
gacgaacgcaagcgtctggcgcagcagaacccggacctgcacaacgccgagttgagcaag
atgttgggcaagtcgtggaaagcgctgaccctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
aggcgcaagcaggtgaagcgactgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccgccggccgccacgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttccccgagcagggcttcccgaccggcccgccgctgctgcccccgcacatgggc
ggccactaccgcgactgccagggcctgggcgcgcccccgctcgacggctacccgctgccc
acgccggacacgtccccgctggacggcgtggagccggatcccgccttcttcgccgcgccg
ctgcccggggactgtccggcggccggcccctacagctatccgcaggcctcggactacgcg
gggcccccggagccgccagtcggccccatgcactcccggctcagcctggagcaggcgggc
cctgcaatcccgggccacgtggcgccctccagcgccctgcagctgtactacaacgcgatt
agctcgccggcggcgggcggcgggcgcggcttctctatgccgccgcagcagcatccaccc
ggcccggggcagccgtcgccccctcccgaggccctgccctgccgggacggcgcggacccg
aaccagcccgccgagctcctcggggaggtggaccgcacggaatttgaacagtatctacac
tttgtgtgcaagcccgagatgggtctcccttaccagggacatgactctagtgtgaatctc
ccagacagccacggggccatttcctcagtggtgtccgacgccagctctgcggtatattac
tgcaactatcctgacgtttga
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